RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 M0QZ92 97 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 TREHO43280 583 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 CAND2O75155 1236 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 DGAT1O75907 488 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 EYA4O95677 639 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 SSBP05455 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 CMA1P23946 247 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 STAT6P42226 847 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 RARRES1P49788 294 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 CDC42EP1Q00587 391 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 TARBP2Q15633 366 aaKnown RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 TMEM119Q4V9L6 283 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 AXDND1Q5T1B0 1012 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 ZNF618Q5T7W0 954 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 PLA2G4FQ68DD2 849 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 TMEM192Q8IY95 271 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 NME8Q8N427 588 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 FBXL6Q8N531 539 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 IQUBQ8NA54 791 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 MCPH1Q8NEM0 835 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 TRAPPC12Q8WVT3 735 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 TCP11Q8WWU5 503 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 WNT8BQ93098 351 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 YME1L1Q96TA2 773 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 PLIN2Q99541 437 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 BHMT2Q9H2M3 363 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 ATP6V0A4Q9HBG4 840 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 STK17AQ9UEE5 414 aa11.71□□□□□ -0.53
RPAIN-204ENST00000405578 RIF1Q5UIP0 2472 aaKnown RBP11.71□□□□□ -0.53
RPAIN-204ENST00000405578 A0A1W2PQ27 194 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 A0A1W2PQ64 194 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 A0A1W2PQD8 194 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 TBX10O75333 385 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 MAFO75444 373 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 STBD1O95210 358 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 C22orf31O95567 290 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 PLCG1P19174 1290 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 THPOP40225 353 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 VCPP55072 806 aaKnown RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 NPEPPSP55786 919 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 ADAM17P78536 824 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 ZNF200P98182 395 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 ECM1Q16610 540 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 CTC1Q2NKJ3 1217 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 MARCH8Q5T0T0 291 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 IER5Q5VY09 327 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 EFCAB12Q6NXP0 572 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 ATOH1Q92858 354 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 CHAMP1Q96JM3 812 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 MTRQ99707 1265 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 FAM49AQ9H0Q0 323 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 ALG13Q9NP73 1137 aaKnown RBP11.7□□□□□ -0.54
RPAIN-204ENST00000405578 KCND2Q9NZV8 630 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 KCNH3Q9ULD8 1083 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 AKT3Q9Y243 479 aa11.7□□□□□ -0.54
RPAIN-204ENST00000405578 TMEM150BA6NC51 233 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 ZBTB42B2RXF5 422 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 E9PMD0 336 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 ZBTB39O15060 712 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 NCK2O43639 380 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 USO1O60763 962 aaKnown RBP11.69□□□□□ -0.54
RPAIN-204ENST00000405578 CSPG5O95196 566 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 KRT18P05783 430 aaKnown RBP11.69□□□□□ -0.54
RPAIN-204ENST00000405578 PLA2G4BP0C869 781 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 AMPD3Q01432 767 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 HYAL1Q12794 435 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 EMC2Q15006 297 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 SV2BQ7L1I2 683 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 PDILTQ8N807 584 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 FSIP1Q8NA03 581 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 DNAJB3Q8WWF6 145 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
RPAIN-204ENST00000405578 LARP4BQ92615 738 aaKnown RBP11.69□□□□□ -0.54
RPAIN-204ENST00000405578 RAD54LQ92698 747 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 SCLT1Q96NL6 688 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 PNMA5Q96PV4 448 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 TIPINQ9BVW5 301 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 PANK2Q9BZ23 570 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 DHX33Q9H6R0 707 aaKnown RBP11.69□□□□□ -0.54
RPAIN-204ENST00000405578 MAGEF1Q9HAY2 307 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
RPAIN-204ENST00000405578 CD207Q9UJ71 328 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms