RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 AFG1LQ8WV93 481 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 ZHX1Q9UKY1 873 aaPredicted RBP28.01■■■□□ 2.08
CPNE1-205ENST00000401607 ADGRG1Q9Y653 693 aa28.01■■■□□ 2.08
CPNE1-205ENST00000401607 LGALS2P05162 132 aa28.01■■■□□ 2.07
CPNE1-205ENST00000401607 HNRNPH3P31942 346 aaKnown RBP28.01■■■□□ 2.07
CPNE1-205ENST00000401607 BFSP1Q12934 665 aa28.01■■■□□ 2.07
CPNE1-205ENST00000401607 PTPN14Q15678 1187 aa28.01■■■□□ 2.07
CPNE1-205ENST00000401607 USP6NLQ92738 828 aa28.01■■■□□ 2.07
CPNE1-205ENST00000401607 GANQ9H2C0 597 aa28.01■■■□□ 2.07
CPNE1-205ENST00000401607 CEP72Q9P209 647 aa28.01■■■□□ 2.07
CPNE1-205ENST00000401607 IGKV6-21A0A0C4DH24 114 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 HOXC6P09630 235 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 ABCD1P33897 745 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 CRHR2Q13324 411 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 DUSP28Q4G0W2 176 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 ERAP1Q9NZ08 941 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 DOCK3Q8IZD9 2030 aa28■■■□□ 2.07
CPNE1-205ENST00000401607 SLC9A1P19634 815 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 MKRN4PQ13434 485 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-205ENST00000401607 FLRT1Q9NZU1 646 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 PLAGL2Q9UPG8 496 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 TRPC6Q9Y210 931 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 GTPBP10A4D1E9 387 aaKnown RBP27.99■■■□□ 2.07
CPNE1-205ENST00000401607 LRRIQ4A6NIV6 560 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 TMEM88BA6NKF7 163 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 LRRC53A6NM62 1247 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 MAPK13O15264 365 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 ADCY6O43306 1168 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 HBP1O60381 514 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 TRIM49P0CI25 452 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 TRIM49CP0CI26 452 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 PON1P27169 355 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 TM4SF4P48230 202 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 CAPSQ13938 189 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 EXOC3L4Q17RC7 722 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 BRDTQ58F21 947 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-205ENST00000401607 PDXDC1Q6P996 788 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 DEPTORQ8TB45 409 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 TRAPPC12Q8WVT3 735 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 HHIPL1Q96JK4 782 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 RNPEPQ9H4A4 650 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 PLCB1Q9NQ66 1216 aa27.99■■■□□ 2.07
CPNE1-205ENST00000401607 CCDC175P0C221 793 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 FMO5P49326 533 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 CDK17Q00537 523 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 IQSEC1Q6DN90 963 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 INTS8Q75QN2 995 aaKnown RBP27.98■■■□□ 2.07
CPNE1-205ENST00000401607 RRAGAQ7L523 313 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 CACNA2D4Q7Z3S7 1137 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 NLRC4Q9NPP4 1024 aa27.98■■■□□ 2.07
CPNE1-205ENST00000401607 ZNHIT6Q9NWK9 470 aaKnown RBP27.98■■■□□ 2.07
CPNE1-205ENST00000401607 GAS2O43903 313 aaKnown RBP27.97■■■□□ 2.07
CPNE1-205ENST00000401607 ADRB2P07550 413 aa27.97■■■□□ 2.07
CPNE1-205ENST00000401607 ACTN1P12814 892 aa27.97■■■□□ 2.07
CPNE1-205ENST00000401607 SCP2P22307 547 aa27.97■■■□□ 2.07
CPNE1-205ENST00000401607 POLR2FP61218 127 aaKnown RBP27.97■■■□□ 2.07
CPNE1-205ENST00000401607 IER5Q5VY09 327 aa27.97■■■□□ 2.07
CPNE1-205ENST00000401607 GBP6Q6ZN66 633 aa27.97■■■□□ 2.07
CPNE1-205ENST00000401607 GOLGA8IPA6NC78 632 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 GOLGA8JA6NMD2 632 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 HNRNPDLO14979 420 aaKnown RBP27.96■■■□□ 2.07
CPNE1-205ENST00000401607 KRT13P13646 458 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 CBWD6Q4V339 395 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 CBWD3Q5JTY5 395 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 CBWD5Q5RIA9 395 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 LRRC71Q8N4P6 559 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 ACRBPQ8NEB7 543 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 PLEKHO2Q8TD55 490 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 PRPF31Q8WWY3 499 aaKnown RBP27.96■■■□□ 2.07
CPNE1-205ENST00000401607 R3HCC1Q9Y3T6 440 aaKnown RBP27.96■■■□□ 2.07
CPNE1-205ENST00000401607 MCCD1P59942 119 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-205ENST00000401607 DLG4P78352 724 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 PRAMEF19Q5SWL8 479 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 EXOC8Q8IYI6 725 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 TCP11Q8WWU5 503 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 SAAL1Q96ER3 474 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 C16orf70Q9BSU1 422 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 SUGCTQ9HAC7 445 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 SIX2Q9NPC8 291 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 GCNT4Q9P109 453 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 GJD2Q9UKL4 321 aa27.96■■■□□ 2.07
CPNE1-205ENST00000401607 EPN1Q9Y6I3 576 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-205ENST00000401607 NDUFA10O95299 355 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 ZNF286BP0CG31 522 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 HOXD8P13378 290 aaPredicted RBP27.95■■■□□ 2.06
CPNE1-205ENST00000401607 VAMP7P51809 220 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 CCL14Q16627 93 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 C1orf220Q5T0J3 134 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 KLHDC7AQ5VTJ3 777 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 CBWD2Q8IUF1 395 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 OR6J1Q8NGC5 347 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 BICD1Q96G01 975 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 FBXL18Q96ME1 805 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 TMEM134Q9H6X4 195 aa27.95■■■□□ 2.06
CPNE1-205ENST00000401607 GOLGA6L9A6NEM1 432 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 ADCY3O60266 1144 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 PPFIA4O75335 1185 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 PIGRP01833 764 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 MMP3P08254 477 aa27.94■■■□□ 2.06
CPNE1-205ENST00000401607 GARTP22102 1010 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms