RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 PSD3Q9NYI0 1048 aa11.68□□□□□ -0.54
LINC00649-202ENST00000400353 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
LINC00649-202ENST00000400353 GJA3Q9Y6H8 435 aa11.68□□□□□ -0.54
LINC00649-202ENST00000400353 NCANO14594 1321 aa11.68□□□□□ -0.54
LINC00649-202ENST00000400353 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 EVI5O60447 810 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 EGFRP00533 1210 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 YBX3P16989 372 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■□□□□ 9.6
LINC00649-202ENST00000400353 NOP2P46087 812 aaKnown RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 ENPEPQ07075 957 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 BAATQ14032 418 aaPredicted RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 XKR9Q5GH70 373 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 NOL9Q5SY16 702 aaKnown RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 C8orf74Q6P047 294 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 SLC30A5Q8TAD4 765 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 ATP6V0A1Q93050 837 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 TMOD4Q9NZQ9 345 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 AJAP1Q9UKB5 411 aaPredicted RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 PCDHA10Q9Y5I2 948 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 MYH11P35749 1972 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 PARP14Q460N5 1801 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 PHIPQ8WWQ0 1821 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 DDX3XO00571 662 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 BACH1O14867 736 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 KIF4AO95239 1232 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 FTCDO95954 541 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 NR3C2P08235 984 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 TMEM253P0C7T8 217 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 EPHB4P54760 987 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 TNNC1P63316 161 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 NNTQ13423 1086 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 KIF22Q14807 665 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 CBWD6Q4V339 395 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 CBWD3Q5JTY5 395 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 CBWD5Q5RIA9 395 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 AENQ8WTP8 325 aaKnown RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
LINC00649-202ENST00000400353 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 HSPBP1Q9NZL4 362 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 STIM2Q9P246 746 aa11.67□□□□□ -0.54
LINC00649-202ENST00000400353 H0YCG3 227 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 H3BQF6 201 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 PSAPP07602 524 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SCP2P22307 547 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 EMBQ6PCB8 327 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SLFN11Q7Z7L1 901 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 USP37Q86T82 979 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 IFT20Q8IY31 132 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 LRRC57Q8N9N7 239 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 TPCN2Q8NHX9 752 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 INPP4AQ96PE3 977 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 LRRC1Q9BTT6 524 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SUCLA2Q9P2R7 463 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 HPCAL4Q9UM19 191 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 DIS3Q9Y2L1 958 aaKnown RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 EMSYQ7Z589 1322 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 LRRIQ3A6PVS8 624 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 CCNE2O96020 404 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 CXCR5P32302 372 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 CYP2C19P33261 490 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 PEX3P56589 373 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 RTP1P59025 263 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 DMP1Q13316 513 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 DGKZQ13574 1117 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 PLS1Q14651 629 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 UGCGQ16739 394 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 GNPTABQ3T906 1256 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 EPC2Q52LR7 807 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 FAM102BQ5T8I3 360 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 CATSPERGQ6ZRH7 1159 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 MAEAQ7L5Y9 396 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 LMO3Q8TAP4 145 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 LNX1Q8TBB1 728 aaPredicted RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 ACTRT1Q8TDG2 376 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 NCAPGQ9BPX3 1015 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SYT11Q9BT88 431 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 TEX13BQ9BXU2 312 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 IKZF4Q9H2S9 585 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 HOXC10Q9NYD6 342 aa11.66□□□□□ -0.54
LINC00649-202ENST00000400353 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
LINC00649-202ENST00000400353 ATP9AO75110 1047 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 CLUL1Q15846 466 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 MAP4K3Q8IVH8 894 aa11.65□□□□□ -0.54
LINC00649-202ENST00000400353 CTNNBL1Q8WYA6 563 aaPredicted RBP11.65□□□□□ -0.54
LINC00649-202ENST00000400353 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00649-202ENST00000400353 RFFLQ8WZ73 363 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms