RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 ATP2C1P98194 919 aaPredicted RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 CLLU1OSQ5K130 101 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 PADI6Q6TGC4 694 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 BRAPQ7Z569 592 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 SRGAP1Q7Z6B7 1085 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 HSCBQ8IWL3 235 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 THNSL1Q8IYQ7 743 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 IGSF22Q8N9C0 903 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 KLHL23Q8NBE8 558 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 MCPH1Q8NEM0 835 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 CLP1Q92989 425 aaKnown RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 CPB2Q96IY4 423 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 CDK5RAP3Q96JB5 506 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 BHMT2Q9H2M3 363 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 CHST12Q9NRB3 414 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 FAM105AQ9NUU6 356 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 LMCD1Q9NZU5 365 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 PCDHB12Q9Y5F1 795 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 PRUNE2Q8WUY3 3088 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 A0A0U1RQF3 1178 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 E9PMD0 336 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 C5orf67F2Z3F1 127 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 DLL1O00548 723 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 TSPAN1O60635 241 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 ITGB1P05556 798 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 SKIP12755 728 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 ATF7P17544 494 aaPredicted RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 CA8P35219 290 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 FAM189BP81408 668 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 MBTD1Q05BQ5 628 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 IL17AQ16552 155 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 ECM1Q16610 540 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 TCEAL5Q5H9L2 206 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 GLB1LQ6UWU2 654 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 ZBTB8OSQ8IWT0 167 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 COLGALT1Q8NBJ5 622 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 RASSF8Q8NHQ8 419 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 ATXN2LQ8WWM7 1075 aaKnown RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 HLA-CQ95604 372 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 ZNF558Q96NG5 402 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 PLIN2Q99541 437 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 APOL6Q9BWW8 343 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 PLVAPQ9BX97 442 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 MRPL9Q9BYD2 267 aaKnown RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 TRIM6Q9C030 488 aaPredicted RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 GBP3Q9H0R5 595 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 LMAN2LQ9H0V9 348 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 NSUN3Q9H649 340 aaKnown RBP9.33□□□□□ -0.92
USP16-202ENST00000399973 RNF19AQ9NV58 838 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 STK24Q9Y6E0 443 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 BRWD1Q9NSI6 2320 aa9.33□□□□□ -0.92
USP16-202ENST00000399973 MEIS3P2A8K0S8 358 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 B4GALT5O43286 388 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
USP16-202ENST00000399973 FGF18O76093 207 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 EOMESO95936 686 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 XRCC6P12956 609 aaKnown RBP eCLIP9.32□□□□□ -0.92
USP16-202ENST00000399973 SYT1P21579 422 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 MUTP22033 750 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 KCNA5P22460 613 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 DNAJB1P25685 340 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 ARL2P36404 184 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 KCNQ1P51787 676 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 PTENP60484 403 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 RNASELQ05823 741 aaKnown RBP9.32□□□□□ -0.92
USP16-202ENST00000399973 PDIA5Q14554 519 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 AAK1Q2M2I8 961 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 NOTUMQ6P988 496 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
USP16-202ENST00000399973 CDR2LQ86X02 465 aaPredicted RBP9.32□□□□□ -0.92
USP16-202ENST00000399973 URGCPQ8TCY9 931 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 POF1BQ8WVV4 589 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 BSNDQ8WZ55 320 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 P2RX5Q93086 422 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 PGBD4Q96DM1 585 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 CASD1Q96PB1 797 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 ASB2Q96Q27 587 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 KIFC3Q9BVG8 833 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
USP16-202ENST00000399973 EIF2AQ9BY44 585 aaKnown RBP9.32□□□□□ -0.92
USP16-202ENST00000399973 IGFLR1Q9H665 355 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 CWH43Q9H720 699 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 UBE2ZQ9H832 354 aaPredicted RBP9.32□□□□□ -0.92
USP16-202ENST00000399973 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 COG5Q9UP83 839 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 PLAGL2Q9UPG8 496 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 DNM3Q9UQ16 869 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 PCDHGC5Q9Y5F6 944 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 MYO7AQ13402 2215 aa9.32□□□□□ -0.92
USP16-202ENST00000399973 NPTXRO95502 500 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 BMP15O95972 392 aa9.31□□□□□ -0.92
USP16-202ENST00000399973 ITGA4P13612 1032 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms