RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 RAB11FIP4Q86YS3 637 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 GPR152Q8TDT2 470 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 LPPQ93052 612 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 ZNF577Q9BSK1 485 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 GLT8D2Q9H1C3 349 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 DNAJB4Q9UDY4 337 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 CFAP47Q6ZTR5 3102 aa20.4■□□□□ 0.86
UFD1-202ENST00000399523 CNTNAP5Q8WYK1 1306 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 SMCO2A6NFE2 343 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 B4GALT3O60512 393 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 ZNF623O75123 536 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 CSDE1O75534 798 aaKnown RBP20.39■□□□□ 0.85
UFD1-202ENST00000399523 OFD1O75665 1012 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 RNASELQ05823 741 aaKnown RBP20.39■□□□□ 0.85
UFD1-202ENST00000399523 COL9A3Q14050 684 aaPredicted RBP20.39■□□□□ 0.85
UFD1-202ENST00000399523 NLRP7Q8WX94 980 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 BORCS6Q96GS4 357 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 SCLT1Q96NL6 688 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 MYADMQ96S97 322 aa20.39■□□□□ 0.85
UFD1-202ENST00000399523 ZFHX4Q86UP3 3567 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 CLUHO75153 1309 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 CCDC195A0A1B0GUA6 201 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 MEIS3P2A8K0S8 358 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 SGSM2O43147 1006 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 ZNF862O60290 1169 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 PAPLNO95428 1278 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 SDHBP21912 280 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 TTC22Q5TAA0 569 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 ZNF280BQ86YH2 543 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 MAML2Q8IZL2 1156 aaPredicted RBP20.38■□□□□ 0.85
UFD1-202ENST00000399523 GCOM2Q9BZD3 368 aaPredicted RBP20.38■□□□□ 0.85
UFD1-202ENST00000399523 MAN1C1Q9NR34 630 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 ARHGEF3Q9NR81 526 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 MRPL17Q9NRX2 175 aaKnown RBP20.38■□□□□ 0.85
UFD1-202ENST00000399523 NRBP2Q9NSY0 501 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 INPP5FQ9Y2H2 1132 aa20.38■□□□□ 0.85
UFD1-202ENST00000399523 RBM8AQ9Y5S9 174 aaKnown RBP20.38■□□□□ 0.85
UFD1-202ENST00000399523 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 KINO60870 393 aaKnown RBP20.37■□□□□ 0.85
UFD1-202ENST00000399523 OATP04181 439 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 SSBP05455 408 aaKnown RBP eCLIP20.37■□□□□ 0.85
UFD1-202ENST00000399523 GLULP15104 373 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 CDC42EP1Q00587 391 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 SETQ01105 290 aaPredicted RBP20.37■□□□□ 0.85
UFD1-202ENST00000399523 FUT2Q10981 343 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 LONRF3Q496Y0 759 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 TWF2Q6IBS0 349 aaKnown RBP20.37■□□□□ 0.85
UFD1-202ENST00000399523 SGMS1Q86VZ5 419 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 ZNF713Q8N859 430 aaPredicted RBP20.37■□□□□ 0.85
UFD1-202ENST00000399523 GBP3Q9H0R5 595 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 SLC2A4RGQ9NR83 387 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 FAM105AQ9NUU6 356 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 BARHL2Q9NY43 387 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 DPP7Q9UHL4 492 aa20.37■□□□□ 0.85
UFD1-202ENST00000399523 POTEMA6NI47 508 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 RAB27AP51159 221 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 ZNF528Q3MIS6 628 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 DCLRE1AQ6PJP8 1040 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 POTEGQ6S5H5 508 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 MICU3Q86XE3 530 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 GPR161Q8N6U8 529 aaKnown RBP20.36■□□□□ 0.85
UFD1-202ENST00000399523 PJA1Q8NG27 643 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 SAMM50Q9Y512 469 aa20.36■□□□□ 0.85
UFD1-202ENST00000399523 USP24Q9UPU5 2620 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 ANHXE9PGG2 379 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 INPPL1O15357 1258 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 LAMP2P13473 410 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 SFPQP23246 707 aaKnown RBP eCLIP20.35■□□□□ 0.85
UFD1-202ENST00000399523 ATXN1P54253 815 aaKnown RBP20.35■□□□□ 0.85
UFD1-202ENST00000399523 STARD6P59095 220 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 PRKCEQ02156 737 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 DRP2Q13474 957 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 TARBP2Q15633 366 aaKnown RBP20.35■□□□□ 0.85
UFD1-202ENST00000399523 VARS2Q5ST30 1063 aaKnown RBP20.35■□□□□ 0.85
UFD1-202ENST00000399523 ELMSAN1Q6PJG2 1045 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 ZNF707Q96C28 371 aaPredicted RBP20.35■□□□□ 0.85
UFD1-202ENST00000399523 RPS6KC1Q96S38 1066 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 TMEM175Q9BSA9 504 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.35■□□□□ 0.85
UFD1-202ENST00000399523 TCEAL9Q9UHQ7 104 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 V9GY48 417 aaPredicted RBP20.35■□□□□ 0.85
UFD1-202ENST00000399523 MIA3Q5JRA6 1907 aa20.35■□□□□ 0.85
UFD1-202ENST00000399523 MTCL1Q9Y4B5 1905 aaKnown RBP20.35■□□□□ 0.85
UFD1-202ENST00000399523 WDR64B1ANS9 1081 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 DDHD2O94830 711 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 ALDH2P05091 517 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 ADH1AP07327 375 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 JAKMIP3Q5VZ66 844 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 SMG7Q92540 1137 aaKnown RBP20.34■□□□□ 0.85
UFD1-202ENST00000399523 FOXQ1Q9C009 403 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 RBM28Q9NW13 759 aaKnown RBP20.34■□□□□ 0.85
UFD1-202ENST00000399523 PIN4Q9Y237 131 aaKnown RBP20.34■□□□□ 0.85
UFD1-202ENST00000399523 SSX2IPQ9Y2D8 614 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 FAN1Q9Y2M0 1017 aa20.34■□□□□ 0.85
UFD1-202ENST00000399523 A0A087WZ62 844 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 SPTLC1O15269 473 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 TEX28O15482 410 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 RFPL2O75678 378 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 GLUD1P00367 558 aa20.33■□□□□ 0.85
UFD1-202ENST00000399523 SOD2P04179 222 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms