RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 MGAT5BQ3V5L5 792 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 LONRF3Q496Y0 759 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 KRT39Q6A163 491 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ITPRIPL1Q6GPH6 555 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 MYLK4Q86YV6 388 aaPredicted RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 MOV10L1Q9BXT6 1211 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 ABCF3Q9NUQ8 709 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 BCORL1Q5H9F3 1711 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 H3BRJ5 948 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
USP47-203ENST00000399455 TRPA1O75762 1119 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ZBED1O96006 694 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 CHEK2O96017 543 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ACADMP11310 421 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 EFCAB12Q6NXP0 572 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 CCDC170Q8IYT3 715 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 USP28Q96RU2 1077 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 CBX8Q9HC52 389 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 KCND2Q9NZV8 630 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 MID2Q9UJV3 735 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 TLK1Q9UKI8 766 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ERICH4A6NGS2 130 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 INHBAP08476 426 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 MYBL1P10243 752 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 AKR1A1P14550 325 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 IGFBP4P22692 258 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 ANKS3Q6ZW76 656 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 PROM2Q8N271 834 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 PPFIBP2Q8ND30 876 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 SPZ1Q9BXG8 430 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 DRC3Q9H069 523 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 DSEQ9UL01 958 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 PCDHA7Q9UN72 937 aa8.51□□□□□ -1.05
USP47-203ENST00000399455 A6NNZ2 444 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 NVLO15381 856 aaKnown RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 ICAM1P05362 532 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 ZNF543Q08ER8 600 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 WASHC5Q12768 1159 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ZNF235Q14590 738 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 TUBB8Q3ZCM7 444 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 FAM83AQ86UY5 434 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 NSUN7Q8NE18 718 aaKnown RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 HVCN1Q96D96 273 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 RILPQ96NA2 401 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ARHGAP23Q9P227 1491 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ATP2C2O75185 946 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 NR3C2P08235 984 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 TROVE2P10155 538 aaKnown RBP eCLIP8.5□□□□□ -1.05
USP47-203ENST00000399455 IRF1P10914 325 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ZFXP17010 805 aaPredicted RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 HARS2P49590 506 aaKnown RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 RAB27AP51159 221 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ZNF75DP51815 510 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 EPHB3P54753 998 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 PDE1BQ01064 536 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 PPATQ06203 517 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 JADE1Q6IE81 842 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 TRIM72Q6ZMU5 477 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SMIM5Q71RC9 77 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 FBXO33Q7Z6M2 555 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 CSGALNACT1Q8TDX6 532 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 CDCA5Q96FF9 252 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 CENPKQ9BS16 269 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ESRRBO95718 433 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 STX1BP61266 288 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 KIF23Q02241 960 aaPredicted RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 PPIL2Q13356 520 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 EMC2Q15006 297 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 RGMBQ6NW40 437 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ALKBH8Q96BT7 664 aaKnown RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 PPP1R2P1Q96PQ5 205 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 MRPL9Q9BYD2 267 aaKnown RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 HACD3Q9P035 362 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 PRR12Q9ULL5 1215 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 G3BP2Q9UN86 482 aaKnown RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 SP3Q02447 781 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 NOLC1Q14978 699 aaKnown RBP eCLIP8.5□□□□□ -1.05
USP47-203ENST00000399455 TAF11Q15544 211 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 TBC1D10CQ8IV04 446 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 DEPDC1BQ8WUY9 529 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SMYD2Q9NRG4 433 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SERPING1P05155 500 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 TAC1P20366 129 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 KCNB1Q14721 858 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 TMTC4Q5T4D3 741 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 FOPNLQ96NB1 174 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 MED15Q96RN5 788 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SNX2O60749 519 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 GFPT2O94808 682 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SLFN14P0C7P3 912 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 SDC4P31431 198 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 VAMP7P51809 220 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 ATXN3P54252 364 aaPredicted RBP8.5□□□□□ -1.05
USP47-203ENST00000399455 DPF2Q92785 391 aa8.5□□□□□ -1.05
USP47-203ENST00000399455 XYLBO75191 536 aa8.49□□□□□ -1.05
USP47-203ENST00000399455 KPNA1P52294 538 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms