RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SFR1Q86XK3 245 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CEP57L1Q8IYX8 460 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NTPCRQ9BSD7 190 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PRO3102Q9H379 93 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DACT1Q9NYF0 836 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ARHGAP28Q9P2N2 729 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SLC16A4O15374 487 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 MCM4P33991 863 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PHKA2P46019 1235 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 NCKAP1LP55160 1127 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CDC42EP1Q00587 391 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 DPYDQ12882 1025 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 COASYQ13057 564 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TFDP1Q14186 410 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 CNNM3Q8NE01 707 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 GPT2Q8TD30 523 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 KCNN1Q92952 543 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 HPS3Q969F9 1004 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 IFIH1Q9BYX4 1025 aaKnown RBP13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 C17orf75Q9HAS0 396 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 PARVGQ9HBI0 331 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.21
HLA-DQB1-203ENST00000399082 B4GALT5O43286 388 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 TSPAN1O60635 241 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 FAM13AO94988 1023 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 KRT18P05783 430 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 IDEP14735 1019 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 NMT1P30419 496 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 CASP5P51878 434 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 ASIC1P78348 528 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 DSC3Q14574 896 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PPP2R5AQ15172 486 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 ODR4Q5SWX8 454 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 C9orf50Q5SZB4 431 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 CNKSR3Q6P9H4 555 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 RTN4RL1Q86UN2 441 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 USP38Q8NB14 1042 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 DEPTORQ8TB45 409 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 LBHD1Q9BQE6 289 aaPredicted RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 STRA6Q9BX79 667 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 FZD8Q9H461 694 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 ZHX3Q9H4I2 956 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PANK4Q9NVE7 773 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 LARSQ9P2J5 1176 aaKnown RBP13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 USP20Q9Y2K6 914 aa13.7□□□□□ -0.22
HLA-DQB1-203ENST00000399082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 INO80B-WBP1J3KQ70 363 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 TRAK2O60296 914 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PPP1R37O75864 691 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PFKMP08237 780 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 HOXA11P31270 313 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 AMPD3Q01432 767 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PAK2Q13177 524 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PNOCQ13519 176 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 POSTNQ15063 836 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 FAM187BQ17R55 369 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 RASIP1Q5U651 963 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 SEPT8Q92599 483 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 INO80BQ9C086 356 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 OLFML3Q9NRN5 406 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 RANBP2P49792 3224 aaKnown RBP13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PHLPP2Q6ZVD8 1323 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 GPR182O15218 404 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 MYBP10242 640 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 GAP43P17677 238 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 NFX1Q12986 1120 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 SHHQ15465 462 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 KMT5BQ4FZB7 885 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 HERC4Q5GLZ8 1057 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 UBXN11Q5T124 520 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 NT5DC1Q5TFE4 455 aa13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 PSRC1Q6PGN9 363 aaPredicted RBP13.68□□□□□ -0.22
HLA-DQB1-203ENST00000399082 OTOP2Q7RTS6 562 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms