RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 HEXIM2Q96MH2 286 aaKnown RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 AS3MTQ9HBK9 375 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 MRPL40Q9NQ50 206 aaKnown RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ADA2Q9NZK5 511 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 INPP5FQ9Y2H2 1132 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 SPHKAPQ2M3C7 1700 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 KPNA7A9QM74 516 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 KLK7P49862 253 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 KLC3Q6P597 504 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 RYBPQ8N488 228 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 DNAJC9Q8WXX5 260 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ING2Q9H160 280 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ZBTB1Q9Y2K1 713 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 PALLDQ8WX93 1383 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 BMP3P12645 472 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 CUL3Q13618 768 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 SLC18A3Q16572 532 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 KDM7AQ6ZMT4 941 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 SKA2Q8WVK7 121 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 VPS11Q9H270 941 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 GLI2P10070 1586 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ZNF609O15014 1411 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 CPDO75976 1380 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ZNF233A6NK53 670 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 ABL1P00519 1130 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 TEDDM1Q5T9Z0 273 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 PRPF31Q8WWY3 499 aaKnown RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 SLC7A3Q8WY07 619 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 HPS3Q969F9 1004 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 CPVLQ9H3G5 476 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 GEMIN8Q9NWZ8 242 aaKnown RBP9.2□□□□□ -0.94
CTNND1-205ENST00000399050 TFR2Q9UP52 801 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 NRKQ7Z2Y5 1582 aa9.2□□□□□ -0.94
CTNND1-205ENST00000399050 LRRIQ3A6PVS8 624 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SCP2P22307 547 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 LTKP29376 864 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 CCND2P30279 289 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 IL6STP40189 918 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 VAMP7P51809 220 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PSMC1P62191 440 aaKnown RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 KDSRQ06136 332 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 NAALADL2Q58DX5 795 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 MYLK4Q86YV6 388 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SLC35G2Q8TBE7 412 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PRDM4Q9UKN5 801 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 NOD1Q9Y239 953 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SYCE1LA8MT33 242 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 H3BQF6 201 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 MAN1A2O60476 641 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 TAC1P20366 129 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 YWHAHQ04917 246 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 MTERF2Q49AM1 385 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 TMTC4Q5T4D3 741 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 C4orf50Q6ZRC1 276 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SGMS1Q86VZ5 419 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ATP11CQ8NB49 1132 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 GIPC2Q8TF65 315 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 EXT2Q93063 718 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 EDEM3Q9BZQ6 932 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 KANSL2Q9H9L4 492 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 GTSE1Q9NYZ3 720 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 L3MBTL1Q9Y468 752 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PPME1Q9Y570 386 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PFASO15067 1338 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 CDHR2Q9BYE9 1310 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 AP5Z1O43299 807 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 PPIP5K2O43314 1243 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ZNF18P17022 549 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ATICP31939 592 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ANKMY2Q8IV38 441 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ADSSL1Q8N142 457 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 MSTO1Q9BUK6 570 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 APOL6Q9BWW8 343 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SNX25Q9H3E2 840 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 VCPKMTQ9H867 229 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 BARHL2Q9NY43 387 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 SERPINB13Q9UIV8 391 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 EFCAB6Q5THR3 1501 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 OSTNP61366 133 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 GRM4Q14833 912 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 LRRC36Q1X8D7 754 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 OLFML2BQ68BL8 750 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 BZW1Q7L1Q6 419 aaKnown RBP9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ISCUQ9H1K1 167 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ZBTB41Q5SVQ8 909 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 DAB2IPQ5VWQ8 1189 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 USPL1Q5W0Q7 1092 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 FRMD5Q7Z6J6 570 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 C7orf31Q8N865 590 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 ERP27Q96DN0 273 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 AGPAT1Q99943 283 aa9.19□□□□□ -0.94
CTNND1-205ENST00000399050 C11orf70Q9BRQ4 267 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms