RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PLAGL2Q9UPG8 496 aa15.65■□□□□ 0.1
RPRD1A-202ENST00000399022 SPARCL1Q14515 664 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 SLC18A3Q16572 532 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 KAZNQ674X7 775 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 C16orf86Q6ZW13 317 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 PODNQ7Z5L7 613 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 MPHOSPH6Q99547 160 aaKnown RBP15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 TTC1Q99614 292 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 PAPOLBQ9NRJ5 636 aaKnown RBP15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 RGL1Q9NZL6 768 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 RGPD8O14715 1765 aaPredicted RBP15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 SSU72P8A0A1W2PR75 194 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 ECE2O60344 883 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 MAP7D1Q3KQU3 841 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 DCCP43146 1447 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 NRXN3Q9Y4C0 1643 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 AGTP01019 485 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 GAP43P17677 238 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 TRPC3Q13507 836 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 DCUN1D2Q6PH85 259 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 EPM2AIP1Q7L775 607 aaPredicted RBP15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 SYT2Q8N9I0 419 aaPredicted RBP15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 ZFATQ9P243 1243 aa15.64■□□□□ 0.09
RPRD1A-202ENST00000399022 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 HSPA9P38646 679 aaKnown RBP15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 BBOF1Q8ND07 529 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 HIPK4Q8NE63 616 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 UBE2TQ9NPD8 197 aaPredicted RBP15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 C3orf20Q8ND61 904 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 ERP27Q96DN0 273 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 IWS1Q96ST2 819 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 SH2D3AQ9BRG2 576 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 C15orf41Q9Y2V0 281 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 RIC1Q4ADV7 1423 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 TNS2Q63HR2 1409 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 NOP56O00567 594 aaKnown RBP15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 DKC1O60832 514 aaKnown RBP eCLIP15.63■□□□□ 0.094e-7■■■■■ 32.2
RPRD1A-202ENST00000399022 LIG4P49917 911 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 CCDC89Q8N998 374 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 ZNF653Q96CK0 615 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 Q9H521 79 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 LRRIQ4A6NIV6 560 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 OPLAHO14841 1288 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 TRPA1O75762 1119 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 AP1G2O75843 785 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 UBOX5O94941 541 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 NR3C1P04150 777 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 KRT19P08727 400 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 PRLRP16471 622 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 PHBP35232 272 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 SERPINB4P48594 390 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 VPS72Q15906 364 aa15.63■□□□□ 0.09
RPRD1A-202ENST00000399022 SARSP49591 514 aaKnown RBP15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 COPS2P61201 443 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 AP3B2Q13367 1082 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 GRAMD1BQ3KR37 738 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 SP8Q8IXZ3 490 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 DEPTORQ8TB45 409 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 DCAF4Q8WV16 495 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 ANKS1AQ92625 1134 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 GLG1Q92896 1179 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 NFAT5O94916 1531 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 CFAP69A5D8W1 941 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 KCNA3P22001 575 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 SLC29A2Q14542 456 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 LGSNQ5TDP6 509 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 MCF2L2Q86YR7 1114 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 CREG2Q8IUH2 290 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 TEX9Q8N6V9 391 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 PIP4K2CQ8TBX8 421 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 PAGR1Q9BTK6 254 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 KDM4CQ9H3R0 1056 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 GPR75-ASB3A0A0A6YYF3 556 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 PAPOLAP51003 745 aaKnown RBP15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 LONRF1Q17RB8 773 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 CDC42EP5Q6NZY7 148 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 PROM2Q8N271 834 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 NAF1Q96HR8 494 aaKnown RBP15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 ZNF341Q9BYN7 854 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 EDEM3Q9BZQ6 932 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 SLC4A7Q9Y6M7 1214 aa15.62■□□□□ 0.09
RPRD1A-202ENST00000399022 DMP1Q13316 513 aaPredicted RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 KIAA1755Q5JYT7 1200 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 BARGINQ6ZT62 677 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 ANKFY1Q9P2R3 1169 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 CNTNAP4Q9C0A0 1308 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 CAMTA1Q9Y6Y1 1673 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 FAM187AA6NFU0 413 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 NVLO15381 856 aaKnown RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 CHRNA5P30532 468 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 C7orf25Q9BPX7 421 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 TUBB6Q9BUF5 446 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 JMJD4Q9H9V9 463 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms