RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 GOLGA5Q8TBA6 731 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 EEF2KMTQ96G04 330 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 CNOT6LQ96LI5 555 aaKnown RBP18.31■□□□□ 0.52
CDH23-204ENST00000398792 CEP63Q96MT8 703 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 MAP7D2Q96T17 732 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 AGPAT3Q9NRZ7 376 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 EXOC7Q9UPT5 735 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 AKT3Q9Y243 479 aa18.31■□□□□ 0.52
CDH23-204ENST00000398792 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 ASAP2O43150 1006 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 NR3C1P04150 777 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 NR2F2P24468 414 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 EEF1GP26641 437 aaKnown RBP18.3■□□□□ 0.52
CDH23-204ENST00000398792 ZNF75DP51815 510 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 NBPF20Q3BBV1 942 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 APTXQ7Z2E3 356 aaKnown RBP18.3■□□□□ 0.52
CDH23-204ENST00000398792 CTU1Q7Z7A3 348 aaKnown RBP18.3■□□□□ 0.52
CDH23-204ENST00000398792 NLRP4Q96MN2 994 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 C2orf40Q9H1Z8 148 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 TMEM134Q9H6X4 195 aa18.3■□□□□ 0.52
CDH23-204ENST00000398792 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
CDH23-204ENST00000398792 EVPLQ92817 2033 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 SMIM35A0A1B0GVV1 85 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 SERPINC1P01008 464 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 SRGAP2CP0DJJ0 459 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 GNAT1P11488 350 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 EFNA5P52803 228 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 ZBTB8OSQ8IWT0 167 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 KIAA0319LQ8IZA0 1049 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 CCDC113Q9H0I3 377 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 IFNKQ9P0W0 207 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 CGNQ9P2M7 1197 aaKnown RBP18.29■□□□□ 0.52
CDH23-204ENST00000398792 MAGEC2Q9UBF1 373 aaPredicted RBP18.29■□□□□ 0.52
CDH23-204ENST00000398792 LIMA1Q9UHB6 759 aaKnown RBP18.29■□□□□ 0.52
CDH23-204ENST00000398792 GTF2IRD1Q9UHL9 959 aa18.29■□□□□ 0.52
CDH23-204ENST00000398792 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 TISP43B9A030 160 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 CLIC2O15247 247 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 TREHO43280 583 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 CABYRO75952 493 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 VTNP04004 478 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 HSPA1AP0DMV8 641 aaKnown RBP18.28■□□□□ 0.52
CDH23-204ENST00000398792 HSPA1BP0DMV9 641 aaKnown RBP18.28■□□□□ 0.52
CDH23-204ENST00000398792 CYP2C9P11712 490 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 RPL13P26373 211 aaKnown RBP18.28■□□□□ 0.52
CDH23-204ENST00000398792 ACLYP53396 1101 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 SNRPFP62306 86 aaKnown RBP18.28■□□□□ 0.52
CDH23-204ENST00000398792 STRN3Q13033 797 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 ADAM9Q13443 819 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 KRT31Q15323 416 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 RUFY4Q6ZNE9 571 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 SESTD1Q86VW0 696 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 C12orf56Q8IXR9 622 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 ANKRD20A12PQ8NF67 263 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 TSEN34Q9BSV6 310 aaKnown RBP18.28■□□□□ 0.52
CDH23-204ENST00000398792 NFKBIZQ9BYH8 718 aa18.28■□□□□ 0.52
CDH23-204ENST00000398792 XPO4Q9C0E2 1151 aaKnown RBP18.28■□□□□ 0.52
CDH23-204ENST00000398792 K7ERI5 159 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
CDH23-204ENST00000398792 CETN3O15182 167 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 PIGRP01833 764 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 DEKP35659 375 aaKnown RBP18.27■□□□□ 0.52
CDH23-204ENST00000398792 PTENP60484 403 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.52
CDH23-204ENST00000398792 POU5F1BQ06416 359 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 MTFR1Q15390 333 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 SLC39A4Q6P5W5 647 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 FILIP1Q7Z7B0 1213 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 SLC9A9Q8IVB4 645 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 TMEM174Q8WUU8 243 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 MRFAP1L1Q96HT8 127 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 PDLIM2Q96JY6 352 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 CTAGE1Q96RT6 745 aa18.27■□□□□ 0.52
CDH23-204ENST00000398792 FAM49AQ9H0Q0 323 aaPredicted RBP18.27■□□□□ 0.52
CDH23-204ENST00000398792 SLC16A3O15427 465 aaKnown RBP18.27■□□□□ 0.51
CDH23-204ENST00000398792 CBFA2T2O43439 604 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 GNA14O95837 355 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 CCL5P13501 91 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 PHKA2P46019 1235 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 CTCFP49711 727 aaPredicted RBP18.27■□□□□ 0.51
CDH23-204ENST00000398792 GPC3P51654 580 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 LBX1P52954 281 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 UBASH3AP57075 661 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 MYBPC2Q14324 1141 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 FBXO46Q6PJ61 603 aaPredicted RBP18.27■□□□□ 0.51
CDH23-204ENST00000398792 ZNF410Q86VK4 478 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 IFNLR1Q8IU57 520 aaPredicted RBP18.27■□□□□ 0.51
CDH23-204ENST00000398792 BICD1Q96G01 975 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 ZNF668Q96K58 619 aaPredicted RBP18.27■□□□□ 0.51
CDH23-204ENST00000398792 PPP1R16BQ96T49 567 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 IFT122Q9HBG6 1241 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 DMAC2Q9NW81 257 aa18.27■□□□□ 0.51
CDH23-204ENST00000398792 GRIN2DO15399 1336 aa18.26■□□□□ 0.51
CDH23-204ENST00000398792 A0A087WZ62 844 aa18.26■□□□□ 0.51
CDH23-204ENST00000398792 A0A1B0GTH6 734 aa18.26■□□□□ 0.51
CDH23-204ENST00000398792 ANKRD63C9JTQ0 380 aa18.26■□□□□ 0.51
CDH23-204ENST00000398792 EDN1P05305 212 aa18.26■□□□□ 0.51
CDH23-204ENST00000398792 COPB1P53618 953 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms