RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 DACH2Q96NX9 599 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 COG4Q9H9E3 785 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ATP6V0A4Q9HBG4 840 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.46e-7■■■■□ 19.7
TMF1-201ENST00000398559 IP6K2Q9UHH9 426 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 SLC16A4O15374 487 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 SERPINB2P05120 415 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 SEPT8Q92599 483 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 POTEB3A0JP26 581 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ARHGAP10A1A4S6 786 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 POTECB2RU33 542 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ROR1Q01973 937 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 KRT33BQ14525 404 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 POTEBQ6S5H4 581 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 WDR24Q96S15 920 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ZNF185O15231 689 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 CLDN3O15551 220 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ESRRBO95718 433 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 VSNL1P62760 191 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 MTF1Q14872 753 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 CPVLQ9H3G5 476 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 SLITRK6Q9H5Y7 841 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 PVALEFA0A1B0GWK0 134 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 GTPBP10A4D1E9 387 aaKnown RBP12.53□□□□□ -0.4
TMF1-201ENST00000398559 TCP11X1B4DZS4 312 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 IZUMO3Q5VZ72 239 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 PADI6Q6TGC4 694 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 F8W8V4 182 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 NMT2O60551 498 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 KCNA4P22459 653 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 CIITAP33076 1130 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 AP1B1Q10567 949 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 MTMR1Q13613 665 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 CUL3Q13618 768 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 ARHGAP18Q8N392 663 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 GNA15P30679 374 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 MDH1BQ5I0G3 518 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 LRRC8EQ6NSJ5 796 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 MARCH10Q8NA82 808 aaPredicted RBP12.53□□□□□ -0.4
TMF1-201ENST00000398559 GRAMD1AQ96CP6 724 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 MTRQ99707 1265 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 LRRC1Q9BTT6 524 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 ZBTB5O15062 677 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 FOXN1O15353 648 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 BBOX1O75936 387 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 CDC27P30260 824 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 SSTR3P32745 418 aaPredicted RBP12.53□□□□□ -0.4
TMF1-201ENST00000398559 KRT17Q04695 432 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 ARHGEF9O43307 516 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 GPC3P51654 580 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 HDAC4P56524 1084 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
TMF1-201ENST00000398559 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
TMF1-201ENST00000398559 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
TMF1-201ENST00000398559 CCDC22O60826 627 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 RARS2Q5T160 578 aaKnown RBP12.52□□□□□ -0.4
TMF1-201ENST00000398559 CATSPER3Q86XQ3 398 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 ATP11CQ8NB49 1132 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 SPATA4Q8NEY3 305 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 AGR3Q8TD06 166 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 EPN3Q9H201 632 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 KIAA1586Q9HCI6 787 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 PP2D1A8MPX8 630 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 M0QYV0 167 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 PSMC1P62191 440 aaKnown RBP12.52□□□□□ -0.4
TMF1-201ENST00000398559 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 RNF135Q8IUD6 432 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 MS4A14Q96JA4 679 aa12.52□□□□□ -0.4
TMF1-201ENST00000398559 SARS2Q9NP81 518 aaKnown RBP12.52□□□□□ -0.4
TMF1-201ENST00000398559 ABCB11O95342 1321 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 GGPS1O95749 300 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 ZC3H12BQ5HYM0 836 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 HEATR6Q6AI08 1181 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 TMC4Q7Z404 712 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 ZNF341Q9BYN7 854 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 ZNF711Q9Y462 761 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.41
TMF1-201ENST00000398559 RBBP7Q16576 425 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
TMF1-201ENST00000398559 PDCD6IPQ8WUM4 868 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms