RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 CATSPER4Q7RTX7 472 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 PHOSPHO2Q8TCD6 241 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 KIFAP3Q92845 792 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
MBD1-207ENST00000398488 SCAND2PQ9GZW5 306 aaPredicted RBP17.45■□□□□ 0.38
MBD1-207ENST00000398488 GOLPH3LQ9H4A5 285 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 TTC3P53804 2025 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 INO80B-WBP1J3KQ70 363 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 POLR2DO15514 142 aaKnown RBP17.44■□□□□ 0.38
MBD1-207ENST00000398488 TSPAN1O60635 241 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 EFCAB14O75071 495 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 AMHP03971 560 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 NAMPTP43490 491 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 GATMP50440 423 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 FAM189BP81408 668 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 DYMQ7RTS9 669 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 TAS1R3Q7RTX0 852 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 CPB2Q96IY4 423 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 FTHL17Q9BXU8 183 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 NFKBIZQ9BYH8 718 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 INO80BQ9C086 356 aaPredicted RBP17.44■□□□□ 0.38
MBD1-207ENST00000398488 CCDC113Q9H0I3 377 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 HPSEQ9Y251 543 aa17.44■□□□□ 0.38
MBD1-207ENST00000398488 GJB5O95377 273 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 PFKFB1P16118 471 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 SFPQP23246 707 aaKnown RBP eCLIP17.43■□□□□ 0.38
MBD1-207ENST00000398488 CMA1P23946 247 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 CASP1P29466 404 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 UBXN11Q5T124 520 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 CDR2LQ86X02 465 aaPredicted RBP17.43■□□□□ 0.38
MBD1-207ENST00000398488 NKX2-4Q9H2Z4 354 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 FZD8Q9H461 694 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 AGPAT5Q9NUQ2 364 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 KCNH3Q9ULD8 1083 aa17.43■□□□□ 0.38
MBD1-207ENST00000398488 PIN4Q9Y237 131 aaKnown RBP17.43■□□□□ 0.38
MBD1-207ENST00000398488 DENND3A2RUS2 1198 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 SLC16A4O15374 487 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
MBD1-207ENST00000398488 DNAJB2P25686 324 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 SV2BQ7L1I2 683 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 GRAMD1CQ8IYS0 662 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 DEPTORQ8TB45 409 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 DDX12PQ92771 950 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 DRC1Q96MC2 740 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 FIZ1Q96SL8 496 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 RNF19AQ9NV58 838 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 KBTBD4Q9NVX7 518 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 KCND2Q9NZV8 630 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 SERTAD1Q9UHV2 236 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 FAM237AA0A1B0GTK4 181 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 CCDC169A6NNP5 214 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 MEIS3P2A8K0S8 358 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 PLS3P13797 630 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 ARF4P18085 180 aaPredicted RBP17.42■□□□□ 0.38
MBD1-207ENST00000398488 LIG1P18858 919 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 SARSP49591 514 aaKnown RBP17.42■□□□□ 0.38
MBD1-207ENST00000398488 NDUFA8P51970 172 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 ZNF131P52739 623 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 HTRA4P83105 476 aaPredicted RBP17.42■□□□□ 0.38
MBD1-207ENST00000398488 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 ODR4Q5SWX8 454 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 SLC24A5Q71RS6 500 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 Q7L0L9 218 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 IFT74Q96LB3 600 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 TIPINQ9BVW5 301 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 TTYH1Q9H313 450 aaPredicted RBP17.42■□□□□ 0.38
MBD1-207ENST00000398488 RC3H2Q9HBD1 1191 aaKnown RBP17.42■□□□□ 0.38
MBD1-207ENST00000398488 FAM13BQ9NYF5 915 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 ARHGAP28Q9P2N2 729 aa17.42■□□□□ 0.38
MBD1-207ENST00000398488 ACTN4O43707 911 aaKnown RBP17.41■□□□□ 0.38
MBD1-207ENST00000398488 TLL1O43897 1013 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 CA3P07451 260 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 PPP2R5AQ15172 486 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
MBD1-207ENST00000398488 ECHDC2Q86YB7 292 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 IQUBQ8NA54 791 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 NTPCRQ9BSD7 190 aaKnown RBP17.41■□□□□ 0.38
MBD1-207ENST00000398488 EIF2AQ9BY44 585 aaKnown RBP17.41■□□□□ 0.38
MBD1-207ENST00000398488 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 ODF2LQ9ULJ1 636 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 PCDHA11Q9Y5I1 949 aa17.41■□□□□ 0.38
MBD1-207ENST00000398488 MYH11P35749 1972 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 CHD7Q9P2D1 2997 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.4■□□□□ 0.38
MBD1-207ENST00000398488 A0A1W2PQ27 194 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 A0A1W2PQ64 194 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 A0A1W2PQD8 194 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 GADD45BO75293 160 aaPredicted RBP17.4■□□□□ 0.38
MBD1-207ENST00000398488 DGKIO75912 1065 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 PRKCBP05771 671 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 KRT18P05783 430 aaKnown RBP17.4■□□□□ 0.38
MBD1-207ENST00000398488 FGFR1P11362 822 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
MBD1-207ENST00000398488 FAM187BQ17R55 369 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms