RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
HDDC2-202ENST00000398153 ASAP3Q8TDY4 903 aa15.81■□□□□ 0.12
HDDC2-202ENST00000398153 MINDY3Q9H8M7 445 aa15.81■□□□□ 0.12
HDDC2-202ENST00000398153 LMCD1Q9NZU5 365 aa15.81■□□□□ 0.12
HDDC2-202ENST00000398153 CCDC39Q9UFE4 941 aa15.81■□□□□ 0.12
HDDC2-202ENST00000398153 PIN4Q9Y237 131 aaKnown RBP15.81■□□□□ 0.12
HDDC2-202ENST00000398153 CARNS1A5YM72 827 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 C5orf67F2Z3F1 127 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 INO80B-WBP1J3KQ70 363 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 FOSL2P15408 326 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 FGFR4P22455 802 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
HDDC2-202ENST00000398153 MBTD1Q05BQ5 628 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 STK38Q15208 465 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
HDDC2-202ENST00000398153 FAM187BQ17R55 369 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 NOTUMQ6P988 496 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 MAEAQ7L5Y9 396 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 SPRYD3Q8NCJ5 442 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 MYLIPQ8WY64 445 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 PLVAPQ9BX97 442 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 PRDM12Q9H4Q4 367 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 GPRC5CQ9NQ84 441 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 PRMT7Q9NVM4 692 aaPredicted RBP15.8■□□□□ 0.12
HDDC2-202ENST00000398153 ATP6V1DQ9Y5K8 247 aa15.8■□□□□ 0.12
HDDC2-202ENST00000398153 LRRIQ4A6NIV6 560 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 SPTLC2O15270 562 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 PLA2G4BP0C869 781 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 SCP2P22307 547 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 HOXA11P31270 313 aaPredicted RBP15.79■□□□□ 0.12
HDDC2-202ENST00000398153 DDIT3P35638 169 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 SLC12A3P55017 1021 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 CEBPZQ03701 1054 aaKnown RBP15.79■□□□□ 0.12
HDDC2-202ENST00000398153 GRIN1Q05586 938 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 KCNK18Q7Z418 384 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 ZNF598Q86UK7 904 aaKnown RBP15.79■□□□□ 0.12
HDDC2-202ENST00000398153 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 KCNG4Q8TDN1 519 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 ARNTL2Q8WYA1 636 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 PGBD4Q96DM1 585 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 NTPCRQ9BSD7 190 aaKnown RBP15.79■□□□□ 0.12
HDDC2-202ENST00000398153 TMEM117Q9H0C3 514 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 FZD8Q9H461 694 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 STK17AQ9UEE5 414 aa15.79■□□□□ 0.12
HDDC2-202ENST00000398153 RBM19Q9Y4C8 960 aaKnown RBP15.79■□□□□ 0.12
HDDC2-202ENST00000398153 GTPBP6O43824 516 aaPredicted RBP15.78■□□□□ 0.12
HDDC2-202ENST00000398153 TSPAN1O60635 241 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 ARHGEF15O94989 841 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 BRD1O95696 1058 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 BMPR1AP36894 532 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 DMP1Q13316 513 aaPredicted RBP15.78■□□□□ 0.12
HDDC2-202ENST00000398153 MAPK6Q16659 721 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 AMHR2Q16671 573 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 MRPL10Q7Z7H8 261 aaKnown RBP15.78■□□□□ 0.12
HDDC2-202ENST00000398153 ABI1Q8IZP0 508 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 DEPTORQ8TB45 409 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 P2RX5Q93086 422 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 UBN1Q9NPG3 1134 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 AAASQ9NRG9 546 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 ODF2LQ9ULJ1 636 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 FNDC1Q4ZHG4 1894 aaPredicted RBP15.78■□□□□ 0.12
HDDC2-202ENST00000398153 NLRC5Q86WI3 1866 aa15.78■□□□□ 0.12
HDDC2-202ENST00000398153 CNTNAP2Q9UHC6 1331 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 A0A1B0GUA9 196 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 H3BNC9 293 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 ACKR2O00590 384 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 HIP1RO75146 1068 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 LINC00271P0C7V0 271 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 PLCG1P19174 1290 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 SMTNP53814 917 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 CCDC73Q6ZRK6 1079 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 LARP4BQ92615 738 aaKnown RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 RAD54LQ92698 747 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 SYMPKQ92797 1274 aaKnown RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 EPSTI1Q96J88 318 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 C11orf84Q9BUA3 381 aaPredicted RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 RUSC1Q9BVN2 902 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 MRPL9Q9BYD2 267 aaKnown RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 TMEM134Q9H6X4 195 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
HDDC2-202ENST00000398153 PCDHB2Q9Y5E7 798 aa15.77■□□□□ 0.12
HDDC2-202ENST00000398153 CDH23Q9H251 3354 aa15.77■□□□□ 0.11
HDDC2-202ENST00000398153 TBKBP1A7MCY6 615 aa15.76■□□□□ 0.11
HDDC2-202ENST00000398153 H0YCG3 227 aa15.76■□□□□ 0.11
HDDC2-202ENST00000398153 CUTAO60888 179 aa15.76■□□□□ 0.11
HDDC2-202ENST00000398153 SSBP05455 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDDC2-202ENST00000398153 ARF4P18085 180 aaPredicted RBP15.76■□□□□ 0.11
HDDC2-202ENST00000398153 ABCD1P33897 745 aa15.76■□□□□ 0.11
HDDC2-202ENST00000398153 PKP1Q13835 747 aa15.76■□□□□ 0.11
HDDC2-202ENST00000398153 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms