RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 ELAC1Q9H777 363 aaKnown RBP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 REV3LO60673 3130 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 ERLIN2O94905 339 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 FGFR1P11362 822 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 PKP1Q13835 747 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 SLC39A14Q15043 492 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 SPECC1Q5M775 1068 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 TMEM192Q8IY95 271 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 KCTD17Q8N5Z5 321 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 MAFAQ8NHW3 353 aaPredicted RBP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 PKNOX2Q96KN3 472 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 NFKBIZQ9BYH8 718 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 CSRNP2Q9H175 543 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 AGPAT5Q9NUQ2 364 aa11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 SRPRBQ9Y5M8 271 aaKnown RBP11.82□□□□□ -0.52
AL390728.1-201ENST00000397642 VCANP13611 3396 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 TBKBP1A7MCY6 615 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 EOMESO95936 686 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 PCBP1Q15365 356 aaKnown RBP eCLIP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 RINT1Q6NUQ1 792 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 CMTR2Q8IYT2 770 aaKnown RBP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 RASSF8Q8NHQ8 419 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 BSNDQ8WZ55 320 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 KIFAP3Q92845 792 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 ZNF396Q96N95 335 aaPredicted RBP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 SAMD11Q96NU1 681 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 CLIC6Q96NY7 704 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 RUSC1Q9BVN2 902 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 FBXO2Q9UK22 296 aaPredicted RBP11.81□□□□□ -0.52
AL390728.1-201ENST00000397642 SLC26A4O43511 780 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 RRP9O43818 475 aaKnown RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 LPXNO60711 386 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 F13A1P00488 732 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 BMPR1AP36894 532 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 KARSQ15046 597 aaKnown RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 PPP2R5AQ15172 486 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 LONRF3Q496Y0 759 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 TMEM119Q4V9L6 283 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 C1orf186Q6ZWK4 172 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 USP49Q70CQ1 688 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 SYT2Q8N9I0 419 aaPredicted RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 CLP1Q92989 425 aaKnown RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 EPSTI1Q96J88 318 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 IFT74Q96LB3 600 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 FAM105AQ9NUU6 356 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 MRPL42Q9Y6G3 142 aaKnown RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 BRWD1Q9NSI6 2320 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 HOXA2O43364 376 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 TSPAN1O60635 241 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 HIP1RO75146 1068 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 PLA2G4BP0C869 781 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 SKIP12755 728 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 ATF7P17544 494 aaPredicted RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 CTNNB1P35222 781 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 NAMPTP43490 491 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 SLC12A3P55017 1021 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 RAD51AP2Q09MP3 1159 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 STK38Q15208 465 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 CCDC85BQ15834 202 aaPredicted RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 ZBTB8OSQ8IWT0 167 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 LINC00301Q8NCQ3 95 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 PPM1EQ8WY54 764 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 CPB2Q96IY4 423 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
AL390728.1-201ENST00000397642 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 B4GALT5O43286 388 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 ZNF623O75123 536 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 PLCG1P19174 1290 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 POU3F3P20264 500 aaPredicted RBP11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 AXLP30530 894 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 RAB27AP51159 221 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 DHX8Q14562 1220 aaKnown RBP11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 AMHR2Q16671 573 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 CDCA2Q69YH5 1023 aaPredicted RBP11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 NOTUMQ6P988 496 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 DAW1Q8N136 415 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 MICALL1Q8N3F8 863 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 DEPTORQ8TB45 409 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 LPPQ93052 612 aa11.79□□□□□ -0.52
AL390728.1-201ENST00000397642 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms