RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 JAM2P57087 298 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 POTEGQ6S5H5 508 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 POTEEQ6S8J3 1075 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 KCNK18Q7Z418 384 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 IMPG2Q9BZV3 1241 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 SLC39A2Q9NP94 309 aa6.37□□□□□ -1.39
PTPRD-206ENST00000397617 INPP5BP32019 993 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NKX3-2P78367 333 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 WDR78Q5VTH9 848 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 CDCA2Q69YH5 1023 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 C15orf39Q6ZRI6 1047 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SYDE1Q6ZW31 735 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ISCUQ9H1K1 167 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 VPS16Q9H269 839 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ASTN1O14525 1302 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ARHGEF37A1IGU5 675 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 GSCP56915 257 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 IRX3P78415 501 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SNAPC2Q13487 334 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PSMD6Q15008 389 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 HSP90B2PQ58FF3 399 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ARCQ7LC44 396 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 C3orf20Q8ND61 904 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 LRRC45Q96CN5 670 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 RPAP3Q9H6T3 665 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NHEJ1Q9H9Q4 299 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 HACL1Q9UJ83 578 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SNCAIPQ9Y6H5 919 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ARID2Q68CP9 1835 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 A0A0B4J269 797 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 GLTPD2A6NH11 291 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 RRN3P2A6NIE6 340 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF487B1APH4 448 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 CETPP11597 493 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ECE1P42892 770 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 CTNNBL1Q8WYA6 563 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SMARCAD1Q9H4L7 1026 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 IFT122Q9HBG6 1241 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 L1RE1Q9UN81 338 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 DERAQ9Y315 318 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 CDC25AP30304 524 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 MRPS9P82933 396 aaKnown RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NBPF9Q3BBW0 867 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ZBTB8OSQ8IWT0 167 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PSPC1Q8WXF1 523 aaKnown RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PLEKHA5Q9HAU0 1116 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 WDR90Q96KV7 1748 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 YWHABP31946 246 aaKnown RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 STX17P56962 302 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SNRNP48Q6IEG0 339 aaKnown RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF410Q86VK4 478 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 EXOC4Q96A65 974 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 GPR101Q96P66 508 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ARHGAP20Q9P2F6 1191 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 IL18RAPO95256 599 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ZSCAN20P17040 1043 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SLC16A2P36021 539 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 ALS2CLQ60I27 953 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NCAPH2Q6IBW4 605 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 HOMEZQ8IX15 550 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 GRAMD1CQ8IYS0 662 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NUDT12Q9BQG2 462 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PARP2Q9UGN5 583 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SCINQ9Y6U3 715 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 EP400Q96L91 3159 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PP2D1A8MPX8 630 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 F8VZ95 297 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 URI1O94763 535 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 MAPK4P31152 587 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 SOX5P35711 763 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 TNFAIP2Q03169 654 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 PPFIA1Q13136 1202 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 IRF2BP2Q7Z5L9 587 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NT5C1BQ96P26 610 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 TRERF1Q96PN7 1200 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 FAM53CQ9NYF3 392 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 NOC2LQ9Y3T9 749 aaKnown RBP6.36□□□□□ -1.39
PTPRD-206ENST00000397617 DOCK5Q9H7D0 1870 aa6.36□□□□□ -1.39
PTPRD-206ENST00000397617 MCM3APO60318 1980 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 E9PMD0 336 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 B4GALT4O60513 344 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 PRPF6O94906 941 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 BRSK2Q8IWQ3 736 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 P2RX7Q99572 595 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 GGA3Q9NZ52 723 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 STRIP2Q9ULQ0 834 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 TBX20Q9UMR3 447 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 SCN10AQ9Y5Y9 1956 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 SSBP05455 408 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 OSBPP22059 807 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 TMOD1P28289 359 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ATICP31939 592 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MFAP3P55082 362 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 EIF3BP55884 814 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 CAV1Q03135 178 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ITGB3BPQ13352 177 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 TTLL4Q14679 1199 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms