RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 ZNF296Q8WUU4 475 aaPredicted RBP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 NIFKQ9BYG3 293 aaKnown RBP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 LZTFL1Q9NQ48 299 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 EIF3DO15371 548 aaKnown RBP eCLIP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 FKTNO75072 461 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 TADA3O75528 432 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 DGAT1O75907 488 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 LCA5LO95447 670 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 MMP3P08254 477 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 POLGP54098 1239 aaPredicted RBP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 SOX10P56693 466 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 KCNMA1Q12791 1236 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 FRMD5Q7Z6J6 570 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 BAP1Q92560 729 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 SYN2Q92777 582 aaPredicted RBP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 FAM167AQ96KS9 214 aa16.82■□□□□ 0.28
PPM1F-202ENST00000397495 IRX2Q9BZI1 471 aaPredicted RBP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 NUCKS1Q9H1E3 243 aaKnown RBP16.82■□□□□ 0.28
PPM1F-202ENST00000397495 A0A0U1RQJ8 604 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 CETN3O15182 167 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 PPFIA4O75335 1185 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 GCNT3O95395 438 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 MYBP10242 640 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 CNGA1P29973 690 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 NMT1P30419 496 aaKnown RBP16.81■□□□□ 0.28
PPM1F-202ENST00000397495 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
PPM1F-202ENST00000397495 ADAM9Q13443 819 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 NELFCDQ8IXH7 590 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 ATP8B4Q8TF62 1192 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 ATRIPQ8WXE1 791 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 BBXQ8WY36 941 aaPredicted RBP16.81■□□□□ 0.28
PPM1F-202ENST00000397495 DRC1Q96MC2 740 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 NHEJ1Q9H9Q4 299 aaPredicted RBP16.81■□□□□ 0.28
PPM1F-202ENST00000397495 ATP6V0A4Q9HBG4 840 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 ERAP1Q9NZ08 941 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 TRPC6Q9Y210 931 aa16.81■□□□□ 0.28
PPM1F-202ENST00000397495 UBE4BO95155 1302 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 HTTP42858 3142 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 CYBAP13498 195 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 AKR1A1P14550 325 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 SLC26A2P50443 739 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 DGKDQ16760 1214 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 RNPEPQ9H4A4 650 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 PDLIM7Q9NR12 457 aa16.8■□□□□ 0.28
PPM1F-202ENST00000397495 TYW1Q9NV66 732 aaKnown RBP16.8■□□□□ 0.28
PPM1F-202ENST00000397495 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
PPM1F-202ENST00000397495 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 ADCY3O60266 1144 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 TUBB4BP68371 445 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 EMC2Q15006 297 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 TARBP2Q15633 366 aaKnown RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 MCPH1Q8NEM0 835 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 RAET1EQ8TD07 263 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 SLC7A3Q8WY07 619 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 PCMTD1Q96MG8 357 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 CEP89Q96ST8 783 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 AP5M1Q9H0R1 490 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 CDC23Q9UJX2 597 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 A6NJR5 290 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 EPHB6O15197 1021 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 SLC16A3O15427 465 aaKnown RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 PRPF6O94906 941 aaKnown RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 PLS3P13797 630 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 H2AFXP16104 143 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 PEX3P56589 373 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 ZC2HC1CQ53FD0 456 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 ZNF569Q5MCW4 686 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 RSRC2Q7L4I2 434 aaKnown RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 LRRN4CLQ8ND94 238 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 TMEM174Q8WUU8 243 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 TRAPPC12Q8WVT3 735 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 CCDC94Q9BW85 323 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 DHX33Q9H6R0 707 aaKnown RBP16.79■□□□□ 0.28
PPM1F-202ENST00000397495 CEP72Q9P209 647 aa16.79■□□□□ 0.28
PPM1F-202ENST00000397495 SSU72P8A0A1W2PR75 194 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 CTAGE9A4FU28 777 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 H3BRB1 525 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 HBP1O60381 514 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 NOL4O94818 638 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 GNRH1P01148 92 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 HOXD8P13378 290 aaPredicted RBP16.78■□□□□ 0.28
PPM1F-202ENST00000397495 NR2F2P24468 414 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
PPM1F-202ENST00000397495 BEX3Q00994 111 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 ELF2Q15723 593 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 ERCC6LQ2NKX8 1250 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 PDXDC1Q6P996 788 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 ZNF720Q7Z2F6 126 aa16.78■□□□□ 0.28
PPM1F-202ENST00000397495 MNS1Q8NEH6 495 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms