RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NRCAMQ92823 1304 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 DCDC2CA8MYV0 355 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 RAG1P15918 1043 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 HOXD13P35453 343 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 PMS1P54277 932 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 STX17P56962 302 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 CHMP4BP1P59074 171 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 ADAM17P78536 824 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 DMP1Q13316 513 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 HIC1Q14526 733 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 ZC2HC1CQ53FD0 456 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 PPP1R13LQ8WUF5 828 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 P2RX5Q93086 422 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 VTI1AQ96AJ9 217 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 SEMA6BQ9H3T3 888 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 SUGCTQ9HAC7 445 aa18.66■□□□□ 0.58
TSPAN4-205ENST00000397406 UBE4BO95155 1302 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 UMODL1Q5DID0 1318 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 ADGRA3Q8IWK6 1321 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 MBLAC1A4D2B0 266 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 TRIM49BA6NDI0 452 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 SMTNL1A8MU46 457 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 BECN2A8MW95 431 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 K7ENM7 598 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 SLC16A4O15374 487 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 PRPF6O94906 941 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 KIF20AO95235 890 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 TIMP1P01033 207 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 CLCN3P51790 818 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 ITGA7Q13683 1181 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 TTI2Q6NXR4 508 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 SLC17A8Q8NDX2 589 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 PSPC1Q8WXF1 523 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 VWCEQ96DN2 955 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 IFT74Q96LB3 600 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 HSD3B7Q9H2F3 369 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 KCTD10Q9H3F6 313 aa18.65■□□□□ 0.58
TSPAN4-205ENST00000397406 CCDC169A6NNP5 214 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 RBAK-RBAKDNI3L0D1 243 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 NAMPTP43490 491 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 SMTNP53814 917 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 GTF2BQ00403 316 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 KCNA1Q09470 495 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 ALCAMQ13740 583 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 CAPSQ13938 189 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 PPP2R5AQ15172 486 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 UVSSAQ2YD98 709 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 ZCWPW2Q504Y3 356 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 SPATA1Q5VX52 437 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 ANKRD40Q6AI12 368 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 NELFCDQ8IXH7 590 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 TMEM161BQ8NDZ6 487 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 PRPF31Q8WWY3 499 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 KCNN1Q92952 543 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 TRPV6Q9H1D0 765 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 KMT5AQ9NQR1 393 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 ARHGAP28Q9P2N2 729 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 SUCLA2Q9P2R7 463 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 HDAC6Q9UBN7 1215 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 PCDHB13Q9Y5F0 798 aa18.64■□□□□ 0.57
TSPAN4-205ENST00000397406 ZMYM2Q9UBW7 1377 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 B4GALT4O60513 344 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 MRE11P49959 708 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 DNM2P50570 870 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 LAMTOR4Q0VGL1 99 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 MXD4Q14582 209 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 KNOP1Q1ED39 458 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 FOXR2Q6PJQ5 311 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 METTL13Q8N6R0 699 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 DUSP9Q99956 384 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 KIFC3Q9BVG8 833 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
TSPAN4-205ENST00000397406 BICDL2A1A5D9 508 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 GOLGA6L19H0YKK7 550 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 CABYRO75952 493 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 CYP2C18P33260 490 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 FPGSQ05932 587 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 FAM109BQ6ICB4 259 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 MFSD5Q6N075 450 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 SESTD1Q86VW0 696 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 C7orf31Q8N865 590 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 HVCN1Q96D96 273 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 GUCD1Q96NT3 240 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 PPP1R12CQ9BZL4 782 aa18.62■□□□□ 0.57
TSPAN4-205ENST00000397406 MROH7Q68CQ1 1323 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 H0YCG3 227 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 ASAP2O43150 1006 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 CSF2RAP15509 400 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 TMOD1P28289 359 aa18.61■□□□□ 0.57
TSPAN4-205ENST00000397406 LRRC63Q05C16 580 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms