RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 N4BP3O15049 544 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 GAS2O43903 313 aaKnown RBP16.38■□□□□ 0.21
CAPN3-207ENST00000397200 FAM13AO94988 1023 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 GYPCP04921 128 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 CAPN2P17655 700 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 KLRC1P26715 233 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 MTHFD1LQ6UB35 978 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 CCDC65Q8IXS2 484 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 ZNF507Q8TCN5 953 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 ZHX3Q9H4I2 956 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 SUGCTQ9HAC7 445 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.21
CAPN3-207ENST00000397200 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
CAPN3-207ENST00000397200 GRIN2DO15399 1336 aa16.38■□□□□ 0.21
CAPN3-207ENST00000397200 IGKV6-21A0A0C4DH24 114 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 CTIFO43310 598 aaKnown RBP16.37■□□□□ 0.21
CAPN3-207ENST00000397200 HOXC8P31273 242 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 ADKP55263 362 aaKnown RBP16.37■□□□□ 0.21
CAPN3-207ENST00000397200 PTPN11Q06124 597 aaPredicted RBP16.37■□□□□ 0.21
CAPN3-207ENST00000397200 RBL2Q08999 1139 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 MARCH8Q5T0T0 291 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 EFCAB12Q6NXP0 572 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 SESTD1Q86VW0 696 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 CNGA4Q8IV77 575 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 REXO1L1PQ8IX06 675 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 METTL13Q8N6R0 699 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 TCP11Q8WWU5 503 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 KIFAP3Q92845 792 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 POLD4Q9HCU8 107 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 GPRC5CQ9NQ84 441 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 GTF2IRD1Q9UHL9 959 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 COL4A3BPQ9Y5P4 624 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 FRMD3A2A2Y4 597 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 RSPH10B2B2RC85 870 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 RSPH10BP0C881 870 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 GAP43P17677 238 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 TMOD1P28289 359 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 DNM2P50570 870 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 SOX10P56693 466 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 MAPK7Q13164 816 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 ANKRD40Q6AI12 368 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 PPFIBP1Q86W92 1011 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 LRRC71Q8N4P6 559 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 CSGALNACT2Q8N6G5 542 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 TMEM143Q96AN5 459 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 ZBTB10Q96DT7 871 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 SRRTQ9BXP5 876 aaKnown RBP16.37■□□□□ 0.21
CAPN3-207ENST00000397200 POLR3FQ9H1D9 316 aaPredicted RBP16.37■□□□□ 0.21
CAPN3-207ENST00000397200 VPS16Q9H269 839 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 SEMA6BQ9H3T3 888 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 PARVGQ9HBI0 331 aa16.37■□□□□ 0.21
CAPN3-207ENST00000397200 BRCA2P51587 3418 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 MBLAC1A4D2B0 266 aaPredicted RBP16.36■□□□□ 0.21
CAPN3-207ENST00000397200 GOLGA6L9A6NEM1 432 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 SFI1A8K8P3 1242 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 ZSCAN12O43309 604 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 ADAM17P78536 824 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 COASYQ13057 564 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 HIC1Q14526 733 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
CAPN3-207ENST00000397200 IER5Q5VY09 327 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 DAW1Q8N136 415 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 SEZ6LQ9BYH1 1024 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 SENP6Q9GZR1 1112 aaPredicted RBP16.36■□□□□ 0.21
CAPN3-207ENST00000397200 PPP2R2CQ9Y2T4 447 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
CAPN3-207ENST00000397200 KIAA0100Q14667 2235 aaKnown RBP16.36■□□□□ 0.21
CAPN3-207ENST00000397200 PHLPP2Q6ZVD8 1323 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 ARVCFO00192 962 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 TREHO43280 583 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 CYP2C9P11712 490 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 MNX1P50219 401 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 FXR1P51114 621 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 CLCN3P51790 818 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 ZNF131P52739 623 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 LRRC63Q05C16 580 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 GDF6Q6KF10 455 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 SLC43A3Q8NBI5 491 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
CAPN3-207ENST00000397200 LARSQ9P2J5 1176 aaKnown RBP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 MAGEC2Q9UBF1 373 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-207ENST00000397200 SMIM35A0A1B0GVV1 85 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 PLS3P13797 630 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 CASP14P31944 242 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 ARL2P36404 184 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 RTP1P59025 263 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 DMP1Q13316 513 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-207ENST00000397200 DRP2Q13474 957 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 ZCWPW2Q504Y3 356 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 ODR4Q5SWX8 454 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 SFR1Q86XK3 245 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 LINC01465Q8N7H1 131 aa16.34■□□□□ 0.21
CAPN3-207ENST00000397200 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms