RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CNOT10Q9H9A5 744 aaKnown RBP13.09□□□□□ -0.31
SMU1-201ENST00000397149 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 RPS7P62081 194 aaKnown RBP13.09□□□□□ -0.31
SMU1-201ENST00000397149 SNX31Q8N9S9 440 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 IL1RL2Q9HB29 575 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 K7ERI5 159 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 RNF103O00237 685 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 TLR2O60603 784 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 LRRC14Q15048 493 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 APOA5Q6Q788 366 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
SMU1-201ENST00000397149 CDC25AP30304 524 aa13.08□□□□□ -0.31
SMU1-201ENST00000397149 CLK1P49759 484 aaKnown RBP13.08□□□□□ -0.31
SMU1-201ENST00000397149 FAM162AQ96A26 154 aa13.08□□□□□ -0.31
SMU1-201ENST00000397149 SUCLG2Q96I99 432 aa13.08□□□□□ -0.31
SMU1-201ENST00000397149 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.31
SMU1-201ENST00000397149 PLAAQ9Y263 795 aa13.08□□□□□ -0.31
SMU1-201ENST00000397149 IGF1RP08069 1367 aa13.08□□□□□ -0.31
SMU1-201ENST00000397149 RHOBTB1O94844 696 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 FEN1P39748 380 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 MXI1P50539 228 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 ARL4CP56559 192 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 PEX3P56589 373 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 HORMAD1Q86X24 394 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 COMMD2Q86X83 199 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMU1-201ENST00000397149 COA7Q96BR5 231 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 NSMCE4AQ9NXX6 385 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 ANAPC7Q9UJX3 599 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SPATA2Q9UM82 520 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 ABCC4O15439 1325 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 CCDC151A5D8V7 595 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 CNGA2Q16280 664 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 GLYCTKQ8IVS8 523 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SNX24Q9Y343 169 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 EIF2AK2P19525 551 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 SERPINB3P29508 390 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 CENPPQ6IPU0 288 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SLC25A24Q6NUK1 477 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 C11orf88Q6PI97 169 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SLC44A2Q8IWA5 706 aaPredicted RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 MRPL40Q9NQ50 206 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 GPR1P46091 355 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 ME3Q16798 604 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 GALNT4Q8N4A0 578 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 P4HA2O15460 535 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 MLNP12872 115 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 ZNF235Q14590 738 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
SMU1-201ENST00000397149 DGKHQ86XP1 1220 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 SLC10A4Q96EP9 437 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 MAP3K5Q99683 1374 aa13.08□□□□□ -0.32
SMU1-201ENST00000397149 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 ENO4A6NNW6 628 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 ANGPT2O15123 496 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 CTIFO43310 598 aaKnown RBP13.07□□□□□ -0.32
SMU1-201ENST00000397149 PEX1O43933 1283 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 HUS1O60921 280 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 HAUS5O94927 633 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 DLGAP3O95886 979 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 RAD23BP54727 409 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 RAD51Q06609 339 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 IDI1Q13907 227 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 LEMD2Q8NC56 503 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 C17orf80Q9BSJ5 609 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 AMNQ9BXJ7 453 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 ZNF304Q9HCX3 659 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 GGT7Q9UJ14 662 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 CDC23Q9UJX2 597 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 RAD17O75943 681 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 FGGP02679 453 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 BTKQ06187 659 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 UBE2SQ16763 222 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 TADA1Q96BN2 335 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 GALNT8Q9NY28 637 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 UPP2O95045 317 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 HSPA2P54652 639 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 ETF1P62495 437 aaKnown RBP13.07□□□□□ -0.32
SMU1-201ENST00000397149 CNGA3Q16281 694 aa13.07□□□□□ -0.32
SMU1-201ENST00000397149 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms