RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 KIDINS220Q9ULH0 1771 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 EXOC1LA0A1B0GW35 172 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 TMEM247A6NEH6 219 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 MEIS1O00470 390 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 CCT5P48643 541 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 MUM1Q2TAK8 710 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 DEPDC1BQ8WUY9 529 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 CALN1Q9BXU9 219 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 RABEP2Q9H5N1 569 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 LDHDQ86WU2 507 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 EIF2AK1Q9BQI3 630 aaKnown RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 VCPKMTQ9H867 229 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 ZFYVE28Q9HCC9 887 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 RAVER2Q9HCJ3 691 aaKnown RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 NSMCE4AQ9NXX6 385 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 ARHGAP23Q9P227 1491 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 MGEA5O60502 916 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 MOCS3O95396 460 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 UBXN2AP68543 259 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 ZNF280CQ8ND82 737 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 ATP6V1E2Q96A05 226 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 LXNQ9BS40 222 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 DNAJC17Q9NVM6 304 aaKnown RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 PPP1R12AO14974 1030 aaPredicted RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 PNPLA4P41247 253 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 RFFLQ8WZ73 363 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 DNAJC5Q9H3Z4 198 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 DAGLAQ9Y4D2 1042 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 CDC27P30260 824 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 TRADDQ15628 312 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 SYN2Q92777 582 aaPredicted RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 EHD4Q9H223 541 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
GNE-202ENST00000396594 ANGPTL2Q9UKU9 493 aa16.69■□□□□ 0.26
GNE-202ENST00000396594 FLT1P17948 1338 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 BCAS4Q8TDM0 211 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 GRAMD1AQ96CP6 724 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 SAMSN1Q9NSI8 373 aaKnown RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 NFU1Q9UMS0 254 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 TRIM33Q9UPN9 1127 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 LRRN2O75325 713 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 NTSR2O95665 410 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 HOXA13P31271 388 aaPredicted RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 FKBP1AP62942 108 aaKnown RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 BASP1P80723 227 aaKnown RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 DHX9Q08211 1270 aaKnown RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 ARHGAP18Q8N392 663 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 SPATA33Q96N06 139 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 KPNA6O60684 536 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 SPARCL1Q14515 664 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 GABBR1Q9UBS5 961 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 GPR75-ASB3A0A0A6YYF3 556 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 MAP3K7O43318 606 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 PMLP29590 882 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 RBP5P82980 135 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 TWF2Q6IBS0 349 aaKnown RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 C1orf228Q6PIY5 440 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 TRAPPC11Q7Z392 1133 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 SEPT1Q8WYJ6 367 aa16.68■□□□□ 0.26
GNE-202ENST00000396594 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
GNE-202ENST00000396594 INTUQ9ULD6 942 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
GNE-202ENST00000396594 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 SPAG6O75602 509 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
GNE-202ENST00000396594 NNTQ13423 1086 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
GNE-202ENST00000396594 RAB42Q8N4Z0 105 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 KIF9Q9HAQ2 790 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 MTSS1O43312 755 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 SOX5P35711 763 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 IER5Q5VY09 327 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
GNE-202ENST00000396594 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 AGO2Q9UKV8 859 aaKnown RBP16.67■□□□□ 0.26
GNE-202ENST00000396594 RTN2O75298 545 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 WDR75Q8IWA0 830 aaKnown RBP16.67■□□□□ 0.26
GNE-202ENST00000396594 GBP5Q96PP8 586 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 UPF3AQ9H1J1 476 aaKnown RBP16.67■□□□□ 0.26
GNE-202ENST00000396594 CAPN11Q9UMQ6 739 aa16.67■□□□□ 0.26
GNE-202ENST00000396594 A0A087WUV0 522 aaPredicted RBP16.66■□□□□ 0.26
GNE-202ENST00000396594 PPFIA2O75334 1257 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 PLTPP55058 493 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 PGBD1Q96JS3 809 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 MED15Q96RN5 788 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
GNE-202ENST00000396594 PRMT7Q9NVM4 692 aaPredicted RBP16.66■□□□□ 0.26
GNE-202ENST00000396594 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms