RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PIGWQ7Z7B1 504 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 MAGEC3Q8TD91 643 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 PARD3BQ8TEW8 1205 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 ALG3Q92685 438 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 P3H4Q92791 437 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 SAAL1Q96ER3 474 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 THAP2Q9H0W7 228 aa10.62□□□□□ -0.71
TRIM39-203ENST00000396547 GH1P01241 217 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 MMP13P45452 471 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 RPS8P62241 208 aaKnown RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 LACTBP83111 547 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 KRT35Q92764 455 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 EPB41L4BQ9H329 900 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 BSDC1Q9NW68 430 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 MTRF1LQ9UGC7 380 aaKnown RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 SLC12A4Q9UP95 1085 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 USP15Q9Y4E8 981 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 DOCK2Q92608 1830 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 TMEM120BA0PK00 339 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 ANKRD63C9JTQ0 380 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 ASAP2O43150 1006 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 SNX3O60493 162 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 SUN1O94901 812 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 PCK1P35558 622 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 PDE6CP51160 858 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 ATP11AP98196 1134 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 COBLL1Q53SF7 1204 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 C6orf118Q5T5N4 469 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 TRMT1LQ7Z2T5 733 aaKnown RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 LNX1Q8TBB1 728 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 HAS1Q92839 578 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 ARHGEF2Q92974 986 aaKnown RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 RASAL2Q9UJF2 1139 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 BZW2Q9Y6E2 419 aaKnown RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 IRF6O14896 467 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 EDIL3O43854 480 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 CYP11B2P19099 503 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 CNGA2Q16280 664 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 C10orf76Q5T2E6 689 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 DUPD1Q68J44 220 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 CPNE8Q86YQ8 564 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 KCTD10Q9H3F6 313 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 EBF2Q9HAK2 575 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 ETNK1Q9HBU6 452 aa10.61□□□□□ -0.71
TRIM39-203ENST00000396547 SPATS2LQ9NUQ6 558 aaKnown RBP10.61□□□□□ -0.71
TRIM39-203ENST00000396547 PSME4Q14997 1843 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 MYH1P12882 1939 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 MYH4Q9Y623 1939 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 WDR90Q96KV7 1748 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 TCRBV7S2A1N4TA0A589 114 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 KIAA0391O15091 583 aaKnown RBP10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-203ENST00000396547 BAG3O95817 575 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 TRIM49P0CI25 452 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 TRIM49CP0CI26 452 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 MSH2P43246 934 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 CYP2J2P51589 502 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 SESN3P58005 492 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 PTENP60484 403 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 SNAP25P60880 206 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 COPS2P61201 443 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 KLRC3Q07444 240 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ITIH4Q14624 930 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 DRAP1Q14919 205 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ZDHHC24Q6UX98 284 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 EXOC3L1Q86VI1 746 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 NLGN2Q8NFZ4 835 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 HES6Q96HZ4 224 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 BTBD6Q96KE9 485 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 PWWP2AQ96N64 755 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 SETDB2Q96T68 719 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ZDHHC18Q9NUE0 388 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 STXBP5LQ9Y2K9 1186 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 CACNA1SQ13698 1873 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 CFAP73A6NFT4 308 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 MED24O75448 989 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 AP1G2O75843 785 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 CLSTN1O94985 981 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 CALRP27797 417 aaKnown RBP10.6□□□□□ -0.71
TRIM39-203ENST00000396547 SLC8A3P57103 927 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 PDIA5Q14554 519 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 TMEM119Q4V9L6 283 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ANKRD20A2Q5SQ80 823 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ANKRD20A1Q5TYW2 823 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ANKRD20A3Q5VUR7 823 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 CCDC137Q6PK04 289 aaKnown RBP10.6□□□□□ -0.71
TRIM39-203ENST00000396547 KCTD1Q719H9 257 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 PHLDB2Q86SQ0 1253 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 VSIG1Q86XK7 387 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF483Q8TF39 744 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-203ENST00000396547 USP40Q9NVE5 1235 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 DNAJC12Q9UKB3 198 aa10.6□□□□□ -0.71
TRIM39-203ENST00000396547 ALG6Q9Y672 507 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms