RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CABS1Q96KC9 395 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 ATP6V1G3Q96LB4 118 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 THAP2Q9H0W7 228 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 TAF1DQ9H5J8 278 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 DNAJC12Q9UKB3 198 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 PNMA2Q9UL42 364 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 WNT10BO00744 389 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 SHBGP04278 402 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 STAT1P42224 750 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 STAT2P52630 851 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 AP3B2Q13367 1082 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 CBWD6Q4V339 395 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 CBWD3Q5JTY5 395 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 CBWD5Q5RIA9 395 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 DPY19L2P1Q6NXN4 242 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 FBXO22Q8NEZ5 403 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 IL31RAQ8NI17 732 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 SLC35G2Q8TBE7 412 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 FAM151AQ8WW52 585 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
NDE1-201ENST00000396354 ZBED3Q96IU2 234 aaPredicted RBP10.07□□□□□ -0.8
NDE1-201ENST00000396354 SSU72P8A0A1W2PR75 194 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 DDX3XO00571 662 aaKnown RBP eCLIP10.06□□□□□ -0.85e-7■□□□□ 9
NDE1-201ENST00000396354 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 HNRNPH1P31943 449 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 IRF2BP2Q7Z5L9 587 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 C18orf8Q96DM3 657 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 POP1Q99575 1024 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 KIFC3Q9BVG8 833 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 TBK1Q9UHD2 729 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 ZNF536O15090 1300 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 ARP10275 920 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 HNRNPH3P31942 346 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 PPP1R2P41236 205 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 DLG4P78352 724 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 ZKSCAN8Q15776 578 aaPredicted RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 UAP1Q16222 522 aaPredicted RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 FAM178BQ8IXR5 827 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 PSMD1Q99460 953 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 EIF2AK1Q9BQI3 630 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 LRRC27Q9C0I9 530 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 GANQ9H2C0 597 aa10.06□□□□□ -0.8
NDE1-201ENST00000396354 UBE2TQ9NPD8 197 aaPredicted RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 CNOT8Q9UFF9 292 aaKnown RBP10.06□□□□□ -0.8
NDE1-201ENST00000396354 VIMP08670 466 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 TNFAIP3P21580 790 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 CIITAP33076 1130 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 MDH1P40925 334 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 LRCH2Q5VUJ6 765 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 ALS2CLQ60I27 953 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 IQCKQ8N0W5 287 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 PPM1KQ8N3J5 372 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 ANKRD42Q8N9B4 389 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 TPCN2Q8NHX9 752 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 ZC3H15Q8WU90 426 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 WNK4Q96J92 1243 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 PAIP2Q9BPZ3 127 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 RANBP17Q9H2T7 1088 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 UTP11Q9Y3A2 253 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 ZMYM2Q9UBW7 1377 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 ABCB11O95342 1321 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 NFKBIEO00221 500 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 CTNND1O60716 968 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 ACSL3O95573 720 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 CDK17Q00537 523 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 ZNF844Q08AG5 666 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 PTGISQ16647 500 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 LMBRD2Q68DH5 695 aaPredicted RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 SEPT14Q6ZU15 432 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 CCDC121Q6ZUS5 278 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 RNF10Q8N5U6 811 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 KRT35Q92764 455 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 DBR1Q9UK59 544 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 AMFRQ9UKV5 643 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 KDM3AQ9Y4C1 1321 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 PIK3CDO00329 1044 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 NFIBO00712 420 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 GAS7O60861 476 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 CAND2O75155 1236 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 RPSAP08865 295 aaKnown RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 RPA1P27694 616 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms