RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TAB2Q9NYJ8 693 aa22.41■■□□□ 1.18
VCPKMT-202ENST00000395860 ASAP2O43150 1006 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 MYCNP04198 464 aaPredicted RBP22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 CDC25BP30305 580 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 MTIF2P46199 727 aaKnown RBP22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 COPB1P53618 953 aaKnown RBP22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 STRN3Q13033 797 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 TFDP1Q14186 410 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 NFIL3Q16649 462 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 AGPAT3Q9NRZ7 376 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 CGNQ9P2M7 1197 aaKnown RBP22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 A0A1B0GTH6 734 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 LRRC10BA6NIK2 292 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 MSCO60682 206 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 GNA14O95837 355 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 TPM2P07951 284 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 SRGAP2CP0DJJ0 459 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 CCDC40Q4G0X9 1142 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 LINC01465Q8N7H1 131 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 DNAJC5GQ8N7S2 189 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 RNF149Q8NC42 400 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 PPP1R13LQ8WUF5 828 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 VPS16Q9H269 839 aa22.4■■□□□ 1.18
VCPKMT-202ENST00000395860 K7ERI5 159 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 N4BP3O15049 544 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 GJB1P08034 283 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 SNRPFP62306 86 aaKnown RBP22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 NFRKBQ6P4R8 1299 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 CXCL17Q6UXB2 119 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 SPC24Q8NBT2 197 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 KLHDC9Q8NEP7 349 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 KCNN1Q92952 543 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 MAP7D2Q96T17 732 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 TUBGCP2Q9BSJ2 902 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 TMEM134Q9H6X4 195 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 AKT3Q9Y243 479 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 TRIP12Q14669 1992 aaPredicted RBP22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 SCN10AQ9Y5Y9 1956 aa22.39■■□□□ 1.17
VCPKMT-202ENST00000395860 CST5P28325 142 aaPredicted RBP22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 NR1I3Q14994 352 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 TAS1R3Q7RTX0 852 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 ZBTB8OSQ8IWT0 167 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 C7orf31Q8N865 590 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 BICD1Q96G01 975 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 NLRP4Q96MN2 994 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 PTPN22Q9Y2R2 807 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 PHLPP2Q6ZVD8 1323 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 EFNA5P52803 228 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 KCNA10Q16322 511 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 CEP135Q66GS9 1140 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 CDCA2Q69YH5 1023 aaPredicted RBP22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 RNF180Q86T96 592 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 PCSK9Q8NBP7 692 aaKnown RBP22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 C2orf40Q9H1Z8 148 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 INTS13Q9NVM9 706 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 HDAC6Q9UBN7 1215 aa22.38■■□□□ 1.17
VCPKMT-202ENST00000395860 TISP43B9A030 160 aa22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 ASGR1P07306 291 aa22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 CYP2J2P51589 502 aa22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 ARMCX5Q6P1M9 558 aa22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 SH3TC2Q8TF17 1288 aa22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 NOC4LQ9BVI4 516 aaKnown RBP22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 RTN4Q9NQC3 1192 aaKnown RBP22.37■■□□□ 1.17
VCPKMT-202ENST00000395860 C17orf102A2RUQ5 167 aa22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 MBLAC1A4D2B0 266 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 PES1O00541 588 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 HNRNPDLO14979 420 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 EPB41P11171 864 aaKnown RBP22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 GNAT1P11488 350 aa22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 MYBPC2Q14324 1141 aa22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 SLC9A9Q8IVB4 645 aa22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 C12orf56Q8IXR9 622 aa22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 ZNF668Q96K58 619 aaPredicted RBP22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 DMAC2Q9NW81 257 aa22.36■■□□□ 1.17
VCPKMT-202ENST00000395860 ANKRD63C9JTQ0 380 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 SLC16A3O15427 465 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 VTNP04004 478 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 PTMAP06454 111 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 CYP2C9P11712 490 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 LIG4P49917 911 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 MARSP56192 900 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 MAN2A1Q16706 1144 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 CCSAPQ6IQ19 270 aaPredicted RBP22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 PCIF1Q9H4Z3 704 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 FRMD4BQ9Y2L6 1034 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 TEX33O43247 280 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 EXOC3O60645 756 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 AKAP3O75969 853 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 PSMC2P35998 433 aaKnown RBP22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 CASP4P49662 377 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 ADAM17P78536 824 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 NBPF20Q3BBV1 942 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 FRMD5Q7Z6J6 570 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 KIAA0319LQ8IZA0 1049 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 PPP1R16BQ96T49 567 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 CBWD1Q9BRT8 395 aa22.35■■□□□ 1.17
VCPKMT-202ENST00000395860 SMIM35A0A1B0GVV1 85 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 LGALS16A8MUM7 142 aa22.34■■□□□ 1.17
VCPKMT-202ENST00000395860 GOLGA6L6A8MZA4 724 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms