RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 TNFRSF25Q93038 417 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 ATP6V0A4Q9HBG4 840 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 RNF19AQ9NV58 838 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 SEPT9Q9UHD8 586 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-203ENST00000395453 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 PCDHGC5Q9Y5F6 944 aa15.18■□□□□ 0.02
SCAF11-203ENST00000395453 TBKBP1A7MCY6 615 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 CCNT1O60563 726 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 PDGFBP01127 241 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 NEK4P51957 841 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 DUSP6Q16828 381 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 PDE12Q6L8Q7 609 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 ZNF668Q96K58 619 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 NAP1L4Q99733 375 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 SH2D3AQ9BRG2 576 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 CWH43Q9H720 699 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 AAASQ9NRG9 546 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 TYW1Q9NV66 732 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 PLXNA4Q9HCM2 1894 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 P4HBP07237 508 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 FGFR1P11362 822 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 ZSCAN20P17040 1043 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 QARSP47897 775 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 DNM2P50570 870 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 SPIRE1Q08AE8 756 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 NR5A1Q13285 461 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 SPOUT1Q5T280 376 aaKnown RBP15.17■□□□□ 0.02
SCAF11-203ENST00000395453 ECHDC2Q86YB7 292 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 UBALD2Q8IYN6 164 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 VN1R2Q8NFZ6 395 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 CASD1Q96PB1 797 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 TMEM117Q9H0C3 514 aa15.17■□□□□ 0.02
SCAF11-203ENST00000395453 DMDP11532 3685 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 A0A0U1RQF3 1178 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 FAM205CA6NFA0 338 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 HOXA2O43364 376 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 DKC1O60832 514 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 CSDE1O75534 798 aaKnown RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 EOMESO95936 686 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 IBSPP21815 317 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 KRT2P35908 639 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 ID4P47928 161 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 EPHA7Q15375 998 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 TMEM184AQ6ZMB5 413 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 LRRC55Q6ZSA7 311 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 ZNF598Q86UK7 904 aaKnown RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 ZNF410Q86VK4 478 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 C4orf19Q8IY42 314 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 COLGALT1Q8NBJ5 622 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 KREMEN2Q8NCW0 462 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 NLRP7Q8WX94 980 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 JPH2Q9BR39 696 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 GCOM2Q9BZD3 368 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 S1PR5Q9H228 398 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 CYP26B1Q9NR63 512 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 CHST12Q9NRB3 414 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 SUCLA2Q9P2R7 463 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 WRAP73Q9P2S5 460 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-203ENST00000395453 HCSTQ9UBK5 93 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 NR2E1Q9Y466 385 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 PPME1Q9Y570 386 aa15.16■□□□□ 0.02
SCAF11-203ENST00000395453 GVINP1Q7Z2Y8 2422 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 A0A087WZ62 844 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 FGF18O76093 207 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 FGFR4P22455 802 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 TECP42680 631 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 NPEPPSP55786 919 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 MTMR3Q13615 1198 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 PLA2G4FQ68DD2 849 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 ANKRD54Q6NXT1 300 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 EXOC8Q8IYI6 725 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 SLFN12Q8IYM2 578 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 NKD2Q969F2 451 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-203ENST00000395453 FDXACB1Q9BRP7 624 aaPredicted RBP15.15■□□□□ 0.02
SCAF11-203ENST00000395453 DHX33Q9H6R0 707 aaKnown RBP15.15■□□□□ 0.02
SCAF11-203ENST00000395453 SORCS3Q9UPU3 1222 aa15.15■□□□□ 0.02
SCAF11-203ENST00000395453 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 JAK2O60674 1132 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
SCAF11-203ENST00000395453 HOXB8P17481 243 aaPredicted RBP15.14■□□□□ 0.01
SCAF11-203ENST00000395453 ERVFC1P60507 584 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 ST3GAL1Q11201 340 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 KCNC3Q14003 757 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 RHPN2Q8IUC4 686 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 TMEM105Q8N8V8 129 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 SCLT1Q96NL6 688 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 INO80BQ9C086 356 aaPredicted RBP15.14■□□□□ 0.01
SCAF11-203ENST00000395453 IFT122Q9HBG6 1241 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 RGL1Q9NZL6 768 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 LZTS1Q9Y250 596 aa15.14■□□□□ 0.01
SCAF11-203ENST00000395453 FSCN2O14926 492 aa15.13■□□□□ 0.01
SCAF11-203ENST00000395453 LAG3P18627 525 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms