RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 TRIM11Q96F44 468 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 TRAF3IP3Q9Y228 551 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 A0A0A6YYK5 440 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 RSPH10B2B2RC85 870 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 ACSL3O95573 720 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 RSPH10BP0C881 870 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 HARSP12081 509 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 ATP2A2P16615 1042 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 BPIFB4P59827 614 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 ZKSCAN8Q15776 578 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 FAM133BQ5BKY9 247 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 DCUN1D2Q6PH85 259 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 HHIPL2Q6UWX4 724 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 MORC4Q8TE76 937 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 ERP44Q9BS26 406 aa12.56□□□□□ -0.4
UBE2D3-209ENST00000394804 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 BANK1Q8NDB2 785 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 TBC1D31Q96DN5 1066 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 POLR3CQ9BUI4 534 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 ANAPC5Q9UJX4 755 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 GOLGA8IPA6NC78 632 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 GOLGA8JA6NMD2 632 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 NPEPPSP55786 919 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 FYB2Q5VWT5 728 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 JAMLQ86YT9 394 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 MREGQ8N565 214 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 ZNF564Q8TBZ8 553 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 LXNQ9BS40 222 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 AGTPBP1Q9UPW5 1226 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 GOLGB1Q14789 3259 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 M0R2N6 131 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 PHF2O75151 1096 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 BFSP1Q12934 665 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 EPHA7Q15375 998 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 HAS1Q92839 578 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 KLHL29Q96CT2 875 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 SEC16BQ96JE7 1060 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 XPO6Q96QU8 1125 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 RUSC1Q9BVN2 902 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 BAZ2AQ9UIF9 1905 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 HNRNPDLO14979 420 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 GUCY2CP25092 1073 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 RHBDL3P58872 404 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 ARHGEF18Q6ZSZ5 1173 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 EIF1ADQ8N9N8 165 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 C3orf20Q8ND61 904 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 MYO3BQ8WXR4 1341 aa12.55□□□□□ -0.4
UBE2D3-209ENST00000394804 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 NDC80O14777 642 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 CEP55Q53EZ4 464 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 POLLQ9UGP5 575 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 UBE4BO95155 1302 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 CLRN2A0PK11 232 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 ZNF233A6NK53 670 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 AGPSO00116 658 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 IPO5O00410 1097 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 MSH4O15457 936 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 ZBED4O75132 1171 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 HIP1RO75146 1068 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 LIG4P49917 911 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 PEX3P56589 373 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 IL9RQ01113 521 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 RINT1Q6NUQ1 792 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 RNF207Q6ZRF8 634 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 NUP85Q9BW27 656 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 TDRD3Q9H7E2 651 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 RAB20Q9NX57 234 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 TJP1Q07157 1748 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 AGTP01019 485 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 HGSNATQ68CP4 663 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 CD302Q8IX05 232 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 ANKRD35Q8N283 1001 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 FAM81BQ96LP2 452 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 GANQ9H2C0 597 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 ANAPC7Q9UJX3 599 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 ALG6Q9Y672 507 aa12.54□□□□□ -0.4
UBE2D3-209ENST00000394804 RTN2O75298 545 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
UBE2D3-209ENST00000394804 IFNB1P01574 187 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms