RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 FIBCD1Q8N539 461 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 ARNTL2Q8WYA1 636 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 NFKBIZQ9BYH8 718 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 POLR3FQ9H1D9 316 aaPredicted RBP9.5□□□□□ -0.89
APLF-202ENST00000394342 DDX19AQ9NUU7 478 aaKnown RBP9.5□□□□□ -0.89
APLF-202ENST00000394342 TMEM161AQ9NX61 479 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 RWDD3Q9Y3V2 267 aa9.5□□□□□ -0.89
APLF-202ENST00000394342 A0A087WWV3 80 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 EPOPA6NHQ4 379 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 PP2D1A8MPX8 630 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 HOXA2O43364 376 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 CSDE1O75534 798 aaKnown RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 EYA4O95677 639 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 EOMESO95936 686 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 SKIP12755 728 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 CYP11B2P19099 503 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 FGFR4P22455 802 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 GLRA2P23416 452 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 LONP1P36776 959 aaKnown RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 PTENP60484 403 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 CAPSQ13938 189 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 BTG3Q14201 252 aaPredicted RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 SPRED2Q7Z698 418 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 RNF149Q8NC42 400 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 MAFAQ8NHW3 353 aaPredicted RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 ASAP3Q8TDY4 903 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 CLP1Q92989 425 aaKnown RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 MMTAG2Q9BU76 263 aaKnown RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 NT5C3AQ9H0P0 336 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 BHMT2Q9H2M3 363 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 MINDY3Q9H8M7 445 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 CERS4Q9HA82 394 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 AGPAT5Q9NUQ2 364 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 LMCD1Q9NZU5 365 aa9.49□□□□□ -0.89
APLF-202ENST00000394342 MORC2Q9Y6X9 1032 aaPredicted RBP9.49□□□□□ -0.89
APLF-202ENST00000394342 A0A0U1RQF3 1178 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 ERLIN2O94905 339 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 RB1P06400 928 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 CDC25AP30304 524 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 AXLP30530 894 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 RAB27AP51159 221 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 GRB10Q13322 594 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 PTPAQ15257 358 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 TMEM119Q4V9L6 283 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 EPC2Q52LR7 807 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 FAM102BQ5T8I3 360 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 TWF2Q6IBS0 349 aaKnown RBP9.48□□□□□ -0.89
APLF-202ENST00000394342 CABP7Q86V35 215 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 ECHDC2Q86YB7 292 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 TMEM192Q8IY95 271 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 RSPH1Q8WYR4 309 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 KIFAP3Q92845 792 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 CCDC51Q96ER9 411 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 CDK5RAP3Q96JB5 506 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 C17orf80Q9BSJ5 609 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 PLVAPQ9BX97 442 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 C2orf40Q9H1Z8 148 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 PIN4Q9Y237 131 aaKnown RBP9.48□□□□□ -0.89
APLF-202ENST00000394342 CLIC4Q9Y696 253 aa9.48□□□□□ -0.89
APLF-202ENST00000394342 TTC28Q96AY4 2481 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 VWA8A3KMH1 1905 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 TBKBP1A7MCY6 615 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 E9PMD0 336 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 C5orf67F2Z3F1 127 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 H3BNC9 293 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 RFXAPO00287 272 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 MAP3K13O43283 966 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 LPXNO60711 386 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 ZNF623O75123 536 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 LINC00271P0C7V0 271 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 ZSCAN22P10073 491 aaPredicted RBP9.47□□□□□ -0.89
APLF-202ENST00000394342 IBSPP21815 317 aaPredicted RBP9.47□□□□□ -0.89
APLF-202ENST00000394342 IGFBP4P22692 258 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 CTNNB1P35222 781 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 UBA7P41226 1012 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 NAMPTP43490 491 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 GATMP50440 423 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 MBTD1Q05BQ5 628 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
APLF-202ENST00000394342 PPP2R5AQ15172 486 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 PAN2Q504Q3 1202 aaKnown RBP9.47□□□□□ -0.89
APLF-202ENST00000394342 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 CDCA2Q69YH5 1023 aaPredicted RBP9.47□□□□□ -0.89
APLF-202ENST00000394342 MAEAQ7L5Y9 396 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
APLF-202ENST00000394342 ZBTB8OSQ8IWT0 167 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 GDPD5Q8WTR4 605 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 CALML4Q96GE6 196 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 IFT74Q96LB3 600 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 PNMA5Q96PV4 448 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 TIPINQ9BVW5 301 aa9.47□□□□□ -0.89
APLF-202ENST00000394342 TMEM117Q9H0C3 514 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms