RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LRRC27Q9C0I9 530 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 TMEM260Q9NX78 707 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 POLLQ9UGP5 575 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 PCDHGA4Q9Y5G9 962 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 TAF1LQ8IZX4 1826 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 FAM163BP0C2L3 166 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 PABPC1LQ4VXU2 614 aaKnown RBP20.33■□□□□ 0.85
HOXC6-202ENST00000394331 CHADLQ6NUI6 762 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 UNC13DQ70J99 1090 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 DAGLAQ9Y4D2 1042 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 LY75O60449 1722 aa20.33■□□□□ 0.85
HOXC6-202ENST00000394331 C6orf229H3BNL8 230 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 PMS2P54278 862 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 GRB10Q13322 594 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 WASHC2DQ5SRD0 308 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 RBBP8NLQ8NC74 664 aaPredicted RBP20.33■□□□□ 0.84
HOXC6-202ENST00000394331 KIAA0895Q8NCT3 520 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 UTP4Q969X6 686 aaKnown RBP20.33■□□□□ 0.84
HOXC6-202ENST00000394331 TIPINQ9BVW5 301 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 SUDS3Q9H7L9 328 aaPredicted RBP20.33■□□□□ 0.84
HOXC6-202ENST00000394331 ZDHHC18Q9NUE0 388 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 AMACRQ9UHK6 382 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 SCOCQ9UIL1 159 aa20.33■□□□□ 0.84
HOXC6-202ENST00000394331 ATAD5Q96QE3 1844 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 FRMPD2Q68DX3 1309 aaPredicted RBP20.32■□□□□ 0.84
HOXC6-202ENST00000394331 TLR2O60603 784 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 LMNAP02545 664 aaKnown RBP20.32■□□□□ 0.84
HOXC6-202ENST00000394331 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 GYS1P13807 737 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 GABPAQ06546 454 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 C1QTNF12Q5T7M4 302 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 MFSD5Q6N075 450 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 PPP1R18Q6NYC8 613 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 CRAMP1Q96RY5 1269 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 AZI2Q9H6S1 392 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 BLOC1S4Q9NUP1 217 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 AIPL1Q9NZN9 384 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 LRCH1Q9Y2L9 728 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 SUGT1Q9Y2Z0 365 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 THSD7AQ9UPZ6 1657 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 LARP4BQ92615 738 aaKnown RBP20.32■□□□□ 0.84
HOXC6-202ENST00000394331 CD2APQ9Y5K6 639 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 SLC4A7Q9Y6M7 1214 aa20.32■□□□□ 0.84
HOXC6-202ENST00000394331 TTI1O43156 1089 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 UPP2O95045 317 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 DRG2P55039 364 aaKnown RBP20.31■□□□□ 0.84
HOXC6-202ENST00000394331 ARHGAP18Q8N392 663 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 INPP5DQ92835 1189 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 AZIN2Q96A70 460 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 AP1M1Q9BXS5 423 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 PNMA3Q9UL41 463 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 A0A1B0GVG6 124 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 NKRFO15226 690 aaKnown RBP eCLIP20.31■□□□□ 0.84
HOXC6-202ENST00000394331 PDHA1P08559 390 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 NCSTNQ92542 709 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 COA7Q96BR5 231 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 EEF2KMTQ96G04 330 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 SEMA6BQ9H3T3 888 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 DLGAP2Q9P1A6 1054 aa20.31■□□□□ 0.84
HOXC6-202ENST00000394331 ZMYND8Q9ULU4 1186 aaPredicted RBP20.31■□□□□ 0.84
HOXC6-202ENST00000394331 KRT79Q5XKE5 535 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 GUF1Q8N442 669 aaKnown RBP20.3■□□□□ 0.84
HOXC6-202ENST00000394331 ZNF513Q8N8E2 541 aaPredicted RBP20.3■□□□□ 0.84
HOXC6-202ENST00000394331 PNMA5Q96PV4 448 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 CCDC28BQ9BUN5 200 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 ATXN10Q9UBB4 475 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 TMCO1Q9UM00 188 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 IGKV6D-41A0A0C4DH26 115 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 MYMKA6NI61 221 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 RFC5P40937 340 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 SH3BGRP55822 239 aaPredicted RBP20.3■□□□□ 0.84
HOXC6-202ENST00000394331 GTF2IP78347 998 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 DUPD1Q68J44 220 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 LRRC47Q8N1G4 583 aaKnown RBP20.3■□□□□ 0.84
HOXC6-202ENST00000394331 METTL13Q8N6R0 699 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 OPTNQ96CV9 577 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 SUCLA2Q9P2R7 463 aaPredicted RBP20.3■□□□□ 0.84
HOXC6-202ENST00000394331 CDK5RAP2Q96SN8 1893 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 PNMA6FA0A0J9YX94 578 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 TTLL1O95922 423 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 IFI35P80217 286 aaPredicted RBP20.3■□□□□ 0.84
HOXC6-202ENST00000394331 PICALMQ13492 652 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 RNF220Q5VTB9 566 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 SLFN11Q7Z7L1 901 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 GRAMD1AQ96CP6 724 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 FGFR1OP2Q9NVK5 253 aa20.3■□□□□ 0.84
HOXC6-202ENST00000394331 AKR1B1P15121 316 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 KLRC3Q07444 240 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 LCA5Q86VQ0 697 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 RNF25Q96BH1 459 aaPredicted RBP20.29■□□□□ 0.84
HOXC6-202ENST00000394331 ETNK1Q9HBU6 452 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 RIC8AQ9NPQ8 531 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 MYO3BQ8WXR4 1341 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 FAM187AA6NFU0 413 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 SLC37A4O43826 429 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 TDP2O95551 362 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 EYA4O95677 639 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 POLE2P56282 527 aa20.29■□□□□ 0.84
HOXC6-202ENST00000394331 LRRC63Q05C16 580 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 450.3 ms