RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DDX53Q86TM3 631 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 SUGP1Q8IWZ8 645 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 PGBD4Q96DM1 585 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 ASIC4Q96FT7 647 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 ZBP1Q9H171 429 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 DHX33Q9H6R0 707 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 AGPAT5Q9NUQ2 364 aa19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 PIN4Q9Y237 131 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-202ENST00000394082 CCDC194A0A1B0GVG4 234 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 EML1O00423 815 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 SLC37A4O43826 429 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 OFD1O75665 1012 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 CTSAP10619 480 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 RFC5P40937 340 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 PCBP1Q15365 356 aaKnown RBP eCLIP19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 LETM2Q2VYF4 491 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 NOMO2Q5JPE7 1267 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 LLGL2Q6P1M3 1020 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 CATSPER4Q7RTX7 472 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 SRGAP1Q7Z6B7 1085 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 C4orf19Q8IY42 314 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 VPS52Q8N1B4 723 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 IGSF21Q96ID5 467 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 AIFM3Q96NN9 605 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 PDRG1Q9NUG6 133 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 TBC1D13Q9NVG8 400 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 DZANK1Q9NVP4 752 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 COL4A3BPQ9Y5P4 624 aa19.59■□□□□ 0.73
SNRPA1-202ENST00000394082 ASAP2O43150 1006 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 CXCL14O95715 111 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 GALTP07902 379 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 MTHFRP42898 656 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 NUBP1P53384 320 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 PTPN5P54829 565 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 MRPL10Q7Z7H8 261 aaKnown RBP19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 NLRP4Q96MN2 994 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 SH2D3AQ9BRG2 576 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 NRDE2Q9H7Z3 1164 aa19.58■□□□□ 0.72
SNRPA1-202ENST00000394082 CNTNAP2Q9UHC6 1331 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 ZC3H11AO75152 810 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 SCRN1Q12765 414 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 EPHA7Q15375 998 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 OTUD6AQ7L8S5 288 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 PPFIBP1Q86W92 1011 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 KSR1Q8IVT5 923 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 UBALD2Q8IYN6 164 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 PSPC1Q8WXF1 523 aaKnown RBP19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 RIPOR3Q96MK2 946 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 KANSL3Q9P2N6 904 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 KCNJ14Q9UNX9 436 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 PCDHB2Q9Y5E7 798 aa19.57■□□□□ 0.72
SNRPA1-202ENST00000394082 NT5C1B-RDH14C9J2C7 533 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 STK3Q13188 491 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 PLA2G4FQ68DD2 849 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 TMEM173Q86WV6 379 aaPredicted RBP19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 SLFN12Q8IYM2 578 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 PRSS33Q8NF86 280 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 TCP11Q8WWU5 503 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 HAS1Q92839 578 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 LPPQ93052 612 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 CEP170P1Q96L14 293 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 TMEM175Q9BSA9 504 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 SLKQ9H2G2 1235 aaPredicted RBP19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 USTQ9Y2C2 406 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 ZDBF2Q9HCK1 2354 aa19.56■□□□□ 0.72
SNRPA1-202ENST00000394082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 PFKFB2O60825 505 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 HOXA11P31270 313 aaPredicted RBP19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 NPEPPSP55786 919 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 RNASELQ05823 741 aaKnown RBP19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 POU5F1BQ06416 359 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 SPIRE1Q08AE8 756 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 IER5LQ5T953 404 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 KIAA1841Q6NSI8 718 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 AGMOQ6ZNB7 445 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 CNNM3Q8NE01 707 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 URGCPQ8TCY9 931 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 SLC22A17Q8WUG5 538 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 PRPF31Q8WWY3 499 aaKnown RBP19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 WASF1Q92558 559 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 LARP6Q9BRS8 491 aaKnown RBP19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 IRF2BPLQ9H1B7 796 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 POMKQ9H5K3 350 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 ZSWIM4Q9H7M6 989 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 UBN1Q9NPG3 1134 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 WRAP73Q9P2S5 460 aaPredicted RBP19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 SORCS3Q9UPU3 1222 aa19.55■□□□□ 0.72
SNRPA1-202ENST00000394082 KMT2EQ8IZD2 1858 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 MEIS3P2A8K0S8 358 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 CCNT1O60563 726 aaKnown RBP19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 YWHABP31946 246 aaKnown RBP19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 ANAPC15P60006 121 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 LAMTOR4Q0VGL1 99 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 MTMR3Q13615 1198 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 ATAT1Q5SQI0 421 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 ZDHHC14Q8IZN3 488 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 PLCD3Q8N3E9 789 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 LXNQ9BS40 222 aa19.54■□□□□ 0.72
SNRPA1-202ENST00000394082 APOL5Q9BWW9 433 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms