RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 IGF2BP3O00425 579 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDZD4-202ENST00000393758 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
PDZD4-202ENST00000393758 ATF2P15336 505 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 CETN2P41208 172 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 SLMAPQ14BN4 828 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 PRCCQ92733 491 aaPredicted RBP17.3■□□□□ 0.36
PDZD4-202ENST00000393758 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 SYNGAP1Q96PV0 1343 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 HIP1RO75146 1068 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 GPC5P78333 572 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 EPHA7Q15375 998 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 EPC2Q52LR7 807 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 YTHDF3Q7Z739 585 aaKnown RBP17.3■□□□□ 0.36
PDZD4-202ENST00000393758 LNX1Q8TBB1 728 aaPredicted RBP17.3■□□□□ 0.36
PDZD4-202ENST00000393758 C9orf72Q96LT7 481 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 RUNDC3BQ96NL0 473 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 POP1Q99575 1024 aaKnown RBP17.3■□□□□ 0.36
PDZD4-202ENST00000393758 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
PDZD4-202ENST00000393758 SPAG7O75391 227 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 PAX7P23759 505 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 RNF207Q6ZRF8 634 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 RHOT2Q8IXI1 618 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 NUP85Q9BW27 656 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
PDZD4-202ENST00000393758 ETNK1Q9HBU6 452 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 FAM187AA6NFU0 413 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 CYP26A1O43174 497 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 SORBS3O60504 671 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 DRD4P21917 467 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 CHRNA3P32297 505 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 CROCCP2Q86T23 111 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 SPDL1Q96EA4 605 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 LRRC4CQ9HCJ2 640 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 APEX2Q9UBZ4 518 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 ANAPC5Q9UJX4 755 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 TMEM253P0C7T8 217 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 RPL21P46778 160 aaKnown RBP17.29■□□□□ 0.36
PDZD4-202ENST00000393758 MTM1Q13496 603 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 SHROOM1Q2M3G4 852 aaPredicted RBP17.29■□□□□ 0.36
PDZD4-202ENST00000393758 PALB2Q86YC2 1186 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 ALG3Q92685 438 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 TGS1Q96RS0 853 aaKnown RBP17.29■□□□□ 0.36
PDZD4-202ENST00000393758 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
PDZD4-202ENST00000393758 SLC12A6Q9UHW9 1150 aa17.29■□□□□ 0.36
PDZD4-202ENST00000393758 PODXLO00592 558 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ATP6V1G2O95670 118 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 HARSP12081 509 aaKnown RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 MAPK4P31152 587 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 NFIAQ12857 509 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 PLCB4Q15147 1175 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ACCSLQ4AC99 568 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 SYT2Q8N9I0 419 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 NOP53Q9NZM5 478 aaKnown RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 F5H6K3 240 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 GAP43P17677 238 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 RPA1P27694 616 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 MXI1P50539 228 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 PTENP60484 403 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 KLRC3Q07444 240 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 CBWD6Q4V339 395 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 CBWD3Q5JTY5 395 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 CBWD5Q5RIA9 395 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ZNF564Q8TBZ8 553 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ZNF577Q9BSK1 485 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 CARD9Q9H257 536 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 TTC7AQ9ULT0 858 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 PHF2O75151 1096 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ANP32DO95626 131 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 DHX34Q14147 1143 aaKnown RBP17.28■□□□□ 0.36
PDZD4-202ENST00000393758 FMNL3Q8IVF7 1028 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 LRRC57Q8N9N7 239 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 PITPNM3Q9BZ71 974 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ANAPC7Q9UJX3 599 aa17.28■□□□□ 0.36
PDZD4-202ENST00000393758 ERFP50548 548 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 KRT17Q04695 432 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 TAF11Q15544 211 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 DDX4Q9NQI0 724 aaKnown RBP17.27■□□□□ 0.36
PDZD4-202ENST00000393758 LARSQ9P2J5 1176 aaKnown RBP17.27■□□□□ 0.36
PDZD4-202ENST00000393758 CTNNAL1Q9UBT7 734 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 TRPC6Q9Y210 931 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 AGTP01019 485 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 SLC12A3P55017 1021 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 RWDD2BP57060 319 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 KCNJ2P63252 427 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 ELF3P78545 371 aaPredicted RBP17.27■□□□□ 0.36
PDZD4-202ENST00000393758 PREPLQ4J6C6 727 aaPredicted RBP17.27■□□□□ 0.36
PDZD4-202ENST00000393758 HHATQ5VTY9 493 aa17.27■□□□□ 0.36
PDZD4-202ENST00000393758 USP15Q9Y4E8 981 aaPredicted RBP17.27■□□□□ 0.36
PDZD4-202ENST00000393758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.35
PDZD4-202ENST00000393758 TISP43B9A030 160 aa17.27■□□□□ 0.35
PDZD4-202ENST00000393758 CALRP27797 417 aaKnown RBP17.27■□□□□ 0.35
PDZD4-202ENST00000393758 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.35
PDZD4-202ENST00000393758 ERMARDQ5T6L9 678 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms