RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 STAG3L1P0CL83 205 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 XRCC6P12956 609 aaKnown RBP eCLIP8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 LIG1P18858 919 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 PHKA2P46019 1235 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 PTENP60484 403 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 FAM189BP81408 668 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 MBTD1Q05BQ5 628 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 KARSQ15046 597 aaKnown RBP8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 CLLU1OSQ5K130 101 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 ODR4Q5SWX8 454 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 TWF2Q6IBS0 349 aaKnown RBP8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 USP49Q70CQ1 688 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 ECHDC2Q86YB7 292 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 TMEM192Q8IY95 271 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 EXOC8Q8IYI6 725 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 INO80BQ9C086 356 aaPredicted RBP8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 AGPAT5Q9NUQ2 364 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 TMEM161AQ9NX61 479 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 FBXO2Q9UK22 296 aaPredicted RBP8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 MTCH2Q9Y6C9 303 aa8.51□□□□□ -1.05
HMGB3P1-201ENST00000393368 LOXHD1Q8IVV2 1947 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 NPHP3-ACAD11A0A0J9YXS1 232 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 TTLL13PA6NNM8 815 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 ASAP2O43150 1006 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 ERLIN2O94905 339 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 EYA4O95677 639 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CYP11B2P19099 503 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 HOXA11P31270 313 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 PBX3P40426 434 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CLCN6P51797 869 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CDC42EP1Q00587 391 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 GPM6BQ13491 265 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 TFDP1Q14186 410 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 DHX8Q14562 1220 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 MXD4Q14582 209 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 AMHR2Q16671 573 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 TMEM119Q4V9L6 283 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 UBXN11Q5T124 520 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 ARL6IP4Q66PJ3 421 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 LRRC55Q6ZSA7 311 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 SRGAP1Q7Z6B7 1085 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CMTR2Q8IYT2 770 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 ZNF710Q8N1W2 664 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 MCPH1Q8NEM0 835 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 EPSTI1Q96J88 318 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CDK5RAP3Q96JB5 506 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CHAMP1Q96JM3 812 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CASD1Q96PB1 797 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 EIF2AQ9BY44 585 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 CSRNP2Q9H175 543 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 FAM105AQ9NUU6 356 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 TYW1Q9NV66 732 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 TFIP11Q9UBB9 837 aaKnown RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 DNM3Q9UQ16 869 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 INPP5FQ9Y2H2 1132 aa8.5□□□□□ -1.05
HMGB3P1-201ENST00000393368 A0A0U1RQF3 1178 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 GRM6O15303 877 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 HIP1RO75146 1068 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 PLA2G4BP0C869 781 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 ZSCAN22P10073 491 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 PLCG1P19174 1290 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 MUTP22033 750 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 BMPR1AP36894 532 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 UBA7P41226 1012 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 AFF1P51825 1210 aaKnown RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 MAPK7Q13164 816 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 HYIQ5T013 277 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 SPOUT1Q5T280 376 aaKnown RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 CDCA2Q69YH5 1023 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 RINT1Q6NUQ1 792 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 DAW1Q8N136 415 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 RASSF8Q8NHQ8 419 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 CLP1Q92989 425 aaKnown RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 APOL6Q9BWW8 343 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 ZSCAN16Q9H4T2 348 aaPredicted RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 ELAC1Q9H777 363 aaKnown RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 ALG13Q9NP73 1137 aaKnown RBP8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 CHST12Q9NRB3 414 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 DACT1Q9NYF0 836 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 HES2Q9Y543 173 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 PCDHB2Q9Y5E7 798 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 PCDHGC5Q9Y5F6 944 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 VCANP13611 3396 aa8.49□□□□□ -1.05
HMGB3P1-201ENST00000393368 CCDC169A6NNP5 214 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 H3BNC9 293 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 B4GALT3O60512 393 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 NPTXRO95502 500 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 BMP15O95972 392 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 F13A1P00488 732 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 ARF4P18085 180 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 DNAJB1P25685 340 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 LONP1P36776 959 aaKnown RBP8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 SLC12A3P55017 1021 aa8.48□□□□□ -1.05
HMGB3P1-201ENST00000393368 PEX3P56589 373 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms