RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZBTB42B2RXF5 422 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 SLC16A3O15427 465 aaKnown RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 TGFB3P10600 412 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 FKBP1BP68106 108 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 SEZ6Q53EL9 994 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 HGSNATQ68CP4 663 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 SHCBP1Q8NEM2 672 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 LENG1Q96BZ8 264 aaPredicted RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 PPP1R16BQ96T49 567 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 DHX33Q9H6R0 707 aaKnown RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 FAM184BQ9ULE4 1060 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 ZNFX1Q9P2E3 1918 aaKnown RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 LRRIQ4A6NIV6 560 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 LRRC37A2A6NM11 1700 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 GCLMP48507 274 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 WNT7BP56706 349 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 IGBP1P78318 339 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 GFPT1Q06210 699 aaPredicted RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 TERF2Q15554 542 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 TARBP2Q15633 366 aaKnown RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
MKS1-202ENST00000393119 KIFAP3Q92845 792 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 CCDC127Q96BQ5 260 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 HAPLN2Q9GZV7 340 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 GUCA1BQ9UMX6 200 aa16.34■□□□□ 0.21
MKS1-202ENST00000393119 UCHL3P15374 230 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 SMTNP53814 917 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 CHADLQ6NUI6 762 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 TMEM206Q9H813 350 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 ZNHIT6Q9NWK9 470 aaKnown RBP16.33■□□□□ 0.2
MKS1-202ENST00000393119 MORF4L1Q9UBU8 362 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.2
MKS1-202ENST00000393119 FMO5P49326 533 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 CCNA1P78396 465 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 BFSP1Q12934 665 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 PLCB4Q15147 1175 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 ZBTB41Q5SVQ8 909 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 LMBRD2Q68DH5 695 aaPredicted RBP16.33■□□□□ 0.2
MKS1-202ENST00000393119 SCARA3Q6AZY7 606 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.33■□□□□ 0.2
MKS1-202ENST00000393119 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 NIFKQ9BYG3 293 aaKnown RBP16.33■□□□□ 0.2
MKS1-202ENST00000393119 MAF1Q9H063 256 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 KATNBL1Q9H079 304 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 METTL14Q9HCE5 456 aaKnown RBP16.33■□□□□ 0.2
MKS1-202ENST00000393119 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.33■□□□□ 0.2
MKS1-202ENST00000393119 CEP72Q9P209 647 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.2
MKS1-202ENST00000393119 UBE4BO95155 1302 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
MKS1-202ENST00000393119 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 ARHGAP1Q07960 439 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 ZNF569Q5MCW4 686 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 PRPF31Q8WWY3 499 aaKnown RBP16.32■□□□□ 0.2
MKS1-202ENST00000393119 NTPCRQ9BSD7 190 aaKnown RBP16.32■□□□□ 0.2
MKS1-202ENST00000393119 AZI2Q9H6S1 392 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 FLRT1Q9NZU1 646 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
MKS1-202ENST00000393119 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 CAPSQ13938 189 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 NFIL3Q16649 462 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 TDRD12Q587J7 1177 aaKnown RBP16.31■□□□□ 0.2
MKS1-202ENST00000393119 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 ZNF771Q7L3S4 317 aaPredicted RBP16.31■□□□□ 0.2
MKS1-202ENST00000393119 XXYLT1Q8NBI6 393 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 SLC7A3Q8WY07 619 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 BICD1Q96G01 975 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 CCDC42Q96M95 316 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 ST6GALNAC4Q9H4F1 302 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 HNRNPDLO14979 420 aaKnown RBP16.31■□□□□ 0.2
MKS1-202ENST00000393119 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
MKS1-202ENST00000393119 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
MKS1-202ENST00000393119 COPB2P35606 906 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 ARL2P36404 184 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 FAM193AP78312 1265 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 CCL14Q16627 93 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 CDR2LQ86X02 465 aaPredicted RBP16.31■□□□□ 0.2
MKS1-202ENST00000393119 SLC35F6Q8N357 371 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 POMGNT1Q8WZA1 660 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 MAML3Q96JK9 1138 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
MKS1-202ENST00000393119 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 TRPC6Q9Y210 931 aa16.31■□□□□ 0.2
MKS1-202ENST00000393119 ASB14A6NK59 587 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 HNRNPH3P31942 346 aaKnown RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
MKS1-202ENST00000393119 VAMP7P51809 220 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 KIF11P52732 1056 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
MKS1-202ENST00000393119 SFMBT2Q5VUG0 894 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms