RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TNPO2O14787 897 aaKnown RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 PFKFB2O60825 505 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 BRAFP15056 766 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 QKIQ96PU8 341 aaKnown RBP eCLIP15.64■□□□□ 0.099e-12■■■■■ 44.2
CCDC50-201ENST00000392455 CLEC4MQ9H2X3 399 aaPredicted RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 USP28Q96RU2 1077 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 FANCLQ9NW38 375 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 COPG2Q9UBF2 871 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CALN1Q9BXU9 219 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 ZNF804BA4D1E1 1349 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CFAP74Q9C0B2 1584 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 ZNF839A8K0R7 811 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 GGPS1O95749 300 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 MAN2A1Q16706 1144 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 DHX36Q9H2U1 1008 aaKnown RBP15.63■□□□□ 0.09
CCDC50-201ENST00000392455 NCALDP61601 193 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 DAB2IPQ5VWQ8 1189 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 FLAD1Q8NFF5 587 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CYTH2Q99418 400 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 ZNF711Q9Y462 761 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CLRN2A0PK11 232 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 GNAT1P11488 350 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CCT8P50990 548 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 KRT78Q8N1N4 520 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 ADAMTS12P58397 1594 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 ANGPT2O15123 496 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CMA1P23946 247 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 PHKG1Q16816 387 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 EEF2KMTQ96G04 330 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 CNGB3Q9NQW8 809 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 INTUQ9ULD6 942 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 LDHAP00338 332 aaKnown RBP15.63■□□□□ 0.09
CCDC50-201ENST00000392455 OSBPP22059 807 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 TOGARAM2Q6ZUX3 1019 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 EFL1Q7Z2Z2 1120 aaKnown RBP15.63■□□□□ 0.09
CCDC50-201ENST00000392455 FAM149B1Q96BN6 582 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 NRBP1Q9UHY1 535 aa15.63■□□□□ 0.09
CCDC50-201ENST00000392455 STXBP2Q15833 593 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 KCTD16Q68DU8 428 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 COG1Q8WTW3 980 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 CCDC134Q9H6E4 229 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 TMEM63CQ9P1W3 806 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 PLTPP55058 493 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 TAP1Q03518 808 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 NNTQ13423 1086 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 SETD3Q86TU7 594 aaPredicted RBP15.62■□□□□ 0.09
CCDC50-201ENST00000392455 PRPF18Q99633 342 aaKnown RBP15.62■□□□□ 0.09
CCDC50-201ENST00000392455 SLC9A5Q14940 896 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 FAM26FQ5R3K3 315 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 AHI1Q8N157 1196 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 RFWD2Q8NHY2 731 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 DIS3LQ8TF46 1054 aaKnown RBP15.62■□□□□ 0.09
CCDC50-201ENST00000392455 PANX2Q96RD6 677 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 KIAA1586Q9HCI6 787 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 GCNT4Q9P109 453 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 APPL1Q9UKG1 709 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 PSMD3O43242 534 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 CCND2P30279 289 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 TSPAN17Q96FV3 270 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 FIS1Q9Y3D6 152 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 BTBD18B2RXH4 712 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 CTIFO43310 598 aaKnown RBP15.62■□□□□ 0.09
CCDC50-201ENST00000392455 CLK1P49759 484 aaKnown RBP15.62■□□□□ 0.09
CCDC50-201ENST00000392455 ADRM1Q16186 407 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 C16orf89Q6UX73 402 aa15.62■□□□□ 0.09
CCDC50-201ENST00000392455 TBC1D1Q86TI0 1168 aaPredicted RBP15.62■□□□□ 0.09
CCDC50-201ENST00000392455 KCNQ3O43525 872 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 ZNF18P17022 549 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 TFDP2Q14188 446 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 ICE2Q659A1 982 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 HSPA9P38646 679 aaKnown RBP15.61■□□□□ 0.09
CCDC50-201ENST00000392455 VPS37AQ8NEZ2 397 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 GTSE1Q9NYZ3 720 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 TTLL1O95922 423 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 PHKG2P15735 406 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 SCRN1Q12765 414 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 KCTD2Q14681 263 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 LBRQ14739 615 aaKnown RBP15.61■□□□□ 0.09
CCDC50-201ENST00000392455 DNAL1Q4LDG9 190 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 KRT27Q7Z3Y8 459 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 GREM2Q9H772 168 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 NMRK1Q9NWW6 199 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 VGLL3A8MV65 326 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 TSPY1Q01534 308 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 MMRN1Q13201 1228 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 SEMA3FQ13275 785 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 ARMCX4Q5H9R4 360 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 PASD1Q8IV76 773 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 PACSIN1Q9BY11 444 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 RAD21L1Q9H4I0 556 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 KMT5AQ9NQR1 393 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 USE1Q9NZ43 259 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 NCF4Q15080 339 aa15.61■□□□□ 0.09
CCDC50-201ENST00000392455 SRLQ86TD4 932 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms