RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 SLC26A7Q8TE54 656 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 BICD1Q96G01 975 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RMDN2Q96LZ7 410 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 POP1Q99575 1024 aaKnown RBP18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RXFP1Q9HBX9 757 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 GGA2Q9UJY4 613 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 WDR17Q8IZU2 1322 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 USP32Q8NFA0 1604 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 PIK3CAP42336 1068 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 GRIK3Q13003 919 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 TAF1BQ53T94 588 aaPredicted RBP18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MREGQ8N565 214 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 KBTBD4Q9NVX7 518 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 TMOD2Q9NZR1 351 aa18.19■□□□□ 0.5
TRAF3IP1-202ENST00000391993 STAT3P40763 770 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ATXN3P54252 364 aaPredicted RBP18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SEPT6Q14141 434 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 THTPAQ9BU02 230 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 I3L4J1 428 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RAB27AP51159 221 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 PALM2Q8IXS6 379 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CDC42EP4Q9H3Q1 356 aaKnown RBP18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 NDE1Q9NXR1 346 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 PHTF1Q9UMS5 762 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RARAP10276 462 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 LCA5Q86VQ0 697 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 GORASP1Q9BQQ3 440 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MAGEF1Q9HAY2 307 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SIK3Q9Y2K2 1263 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ALG6Q9Y672 507 aa18.18■□□□□ 0.5
TRAF3IP1-202ENST00000391993 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SUPT3HO75486 399 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 BCRP11274 1271 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MAPK7Q13164 816 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 KIAA1683Q9H0B3 1180 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 NKX1-2Q9UD57 310 aaPredicted RBP18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CNTNAP5Q8WYK1 1306 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ZBED4O75132 1171 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 DYNLT1P63172 113 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 IGBP1P78318 339 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 EVX2Q03828 476 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 LACTB2Q53H82 288 aaPredicted RBP18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SFR1Q86XK3 245 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MYLK4Q86YV6 388 aaPredicted RBP18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 OPTNQ96CV9 577 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 EPAS1Q99814 870 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 TBC1D10AQ9BXI6 508 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 LZTS1Q9Y250 596 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MROH5Q6ZUA9 1318 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 POTEFA5A3E0 1075 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RPL21P46778 160 aaKnown RBP18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ALX1Q15699 326 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CNGA2Q16280 664 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 POTEGQ6S5H5 508 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 POTEEQ6S8J3 1075 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MIGA2Q7L4E1 593 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 FBXL16Q8N461 479 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 MAB21L3Q8N8X9 362 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 FAM81AQ8TBF8 368 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 EYA3Q99504 573 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 USP40Q9NVE5 1235 aa18.17■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ATXN2Q99700 1313 aaKnown RBP18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ADAMTS3O15072 1205 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ATP5HO75947 161 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 KRT36O76013 467 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ARFIP2P53365 341 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RABGAP1LQ5R372 815 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CCDC110Q8TBZ0 833 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SPOCK2Q92563 424 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 SLC5A4Q9NY91 659 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ANGPTL2Q9UKU9 493 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ANKMY2Q8IV38 441 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 RNF25Q96BH1 459 aaPredicted RBP18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 TRIM55Q9BYV6 548 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 THAP2Q9H0W7 228 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 TRABDQ9H4I3 376 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 FAM187AA6NFU0 413 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 H3BRJ5 948 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 KLRC4O43908 158 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 STAMBPO95630 424 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CHRNA3P32297 505 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 CDK17Q00537 523 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ICA1Q05084 483 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 FIGNQ5HY92 759 aa18.16■□□□□ 0.5
TRAF3IP1-202ENST00000391993 KLHL33A6NCF5 533 aa18.15■□□□□ 0.5
TRAF3IP1-202ENST00000391993 FAM200BP0CF97 657 aa18.15■□□□□ 0.5
TRAF3IP1-202ENST00000391993 IZUMO2Q6UXV1 221 aa18.15■□□□□ 0.5
TRAF3IP1-202ENST00000391993 PRM3Q9NNZ6 103 aa18.15■□□□□ 0.5
TRAF3IP1-202ENST00000391993 ZCWPW2Q504Y3 356 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms