RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 TRIM49CP0CI26 452 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 KRT13P13646 458 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 KCNA3P22001 575 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
NLRP3-205ENST00000391827 QARSP47897 775 aaKnown RBP11.72□□□□□ -0.53
NLRP3-205ENST00000391827 GTF2BQ00403 316 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 SYCP3Q8IZU3 236 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 HOOK2Q96ED9 719 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 ZIM3Q96PE6 472 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 RUFY1Q96T51 708 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 SLC38A10Q9HBR0 1119 aa11.72□□□□□ -0.53
NLRP3-205ENST00000391827 ZNF277Q9NRM2 450 aaPredicted RBP11.72□□□□□ -0.53
NLRP3-205ENST00000391827 NOC2LQ9Y3T9 749 aaKnown RBP11.72□□□□□ -0.53
NLRP3-205ENST00000391827 ZSCAN5CA6NGD5 496 aaPredicted RBP11.71□□□□□ -0.53
NLRP3-205ENST00000391827 CEP104O60308 925 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 DNA2P51530 1060 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.53
NLRP3-205ENST00000391827 SKOR1P84550 965 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 EPC2Q52LR7 807 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 GLYCTKQ8IVS8 523 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 C4orf19Q8IY42 314 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 IL31RAQ8NI17 732 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 SYTL5Q8TDW5 730 aaPredicted RBP11.71□□□□□ -0.53
NLRP3-205ENST00000391827 SEC14L1Q92503 715 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 IWS1Q96ST2 819 aa11.71□□□□□ -0.53
NLRP3-205ENST00000391827 WNT10BO00744 389 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 PPFIA4O75335 1185 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 FAM153BP0C7A2 387 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 ECHS1P30084 290 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 CLUL1Q15846 466 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 FAM153CQ494X1 144 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.54
NLRP3-205ENST00000391827 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.54
NLRP3-205ENST00000391827 DAAM2Q86T65 1068 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 NIM1KQ8IY84 436 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 CTNNBL1Q8WYA6 563 aaPredicted RBP11.71□□□□□ -0.54
NLRP3-205ENST00000391827 PIK3R5Q8WYR1 880 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 FAM153AQ9UHL3 310 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 AMFRQ9UKV5 643 aa11.71□□□□□ -0.54
NLRP3-205ENST00000391827 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 ANKRD62A6NC57 917 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 VAMP7P51809 220 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 NCKAP1LP55160 1127 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 GSCP56915 257 aaPredicted RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 CETN1Q12798 172 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 MTMR1Q13613 665 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 TTMPQ5BVD1 217 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 GOLPH3Q9H4A6 298 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 FER1L6Q2WGJ9 1857 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 SART1O43290 800 aaKnown RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 BUB1BO60566 1050 aaPredicted RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 RXRBP28702 533 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 JAK3P52333 1124 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 C1orf220Q5T0J3 134 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 CFAP58Q5T655 872 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 RHOT2Q8IXI1 618 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 KLHL7Q8IXQ5 586 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 IFT81Q8WYA0 676 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 TMCO5BA8MYB1 307 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 DDX39AO00148 427 aaKnown RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 DDX3YO15523 660 aaKnown RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 FDX1P10109 184 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 YWHABP31946 246 aaKnown RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 SFNP31947 248 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 PPP2R5EQ16537 467 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 XRRA1Q6P2D8 792 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 LRIG3Q6UXM1 1119 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 DNAAF5Q86Y56 855 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 SUGP1Q8IWZ8 645 aaKnown RBP11.7□□□□□ -0.54
NLRP3-205ENST00000391827 XXYLT1Q8NBI6 393 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 AGPAT1Q99943 283 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 CARD9Q9H257 536 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 ANKEF1Q9NU02 776 aa11.7□□□□□ -0.54
NLRP3-205ENST00000391827 PFASO15067 1338 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 ASTN2O75129 1339 aaPredicted RBP11.69□□□□□ -0.54
NLRP3-205ENST00000391827 EMSYQ7Z589 1322 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 ZNF233A6NK53 670 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 KRIT1O00522 736 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 TNFAIP3P21580 790 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 PPP3CAQ08209 521 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 SPP2Q13103 211 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 PLS1Q14651 629 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 PGM5Q15124 567 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 C11orf63Q6NUN7 778 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 OSGEPQ9NPF4 335 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 HSPBP1Q9NZL4 362 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 FOXN3O00409 490 aaPredicted RBP11.69□□□□□ -0.54
NLRP3-205ENST00000391827 IRAK1P51617 712 aa11.69□□□□□ -0.54
NLRP3-205ENST00000391827 RNASE9P60153 205 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms