RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 MINDY3Q9H8M7 445 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 SLC28A3Q9HAS3 691 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 KCNG1Q9UIX4 513 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 YBX2Q9Y2T7 364 aaKnown RBP16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 TTC3P53804 2025 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 AXLP30530 894 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 MBTD1Q05BQ5 628 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 DHX8Q14562 1220 aaKnown RBP16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 PPP2R2DQ66LE6 453 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 TWF2Q6IBS0 349 aaKnown RBP16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 SHC4Q6S5L8 630 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 ODF2LQ9ULJ1 636 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 PCDHB7Q9Y5E2 793 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 GBF1Q92538 1859 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
IGHV3-53-201ENST00000390627 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 CA3P07451 260 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 SKIP12755 728 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 MYOGP15173 224 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 EFNA5P52803 228 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 PEX3P56589 373 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 RAD51AP2Q09MP3 1159 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 MAPK7Q13164 816 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 MAPK6Q16659 721 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 DAW1Q8N136 415 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 PDILTQ8N807 584 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 PRIMPOLQ96LW4 560 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 ELAC1Q9H777 363 aaKnown RBP16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 POLD4Q9HCU8 107 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 TMEM161AQ9NX61 479 aa16.61■□□□□ 0.25
IGHV3-53-201ENST00000390627 COL4A6Q14031 1691 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 A0A087X0B3 334 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 TSPAN1O60635 241 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 FAM13AO94988 1023 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 PLS3P13797 630 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 NPTX2P47972 431 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 RAB27AP51159 221 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 FAM189BP81408 668 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 FAM187BQ17R55 369 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 NAALADL2Q58DX5 795 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 ARSHQ5FYA8 562 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 NOTUMQ6P988 496 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 PPP4R3CPQ6ZMV5 832 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 SV2BQ7L1I2 683 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 ECHDC2Q86YB7 292 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 CHAMP1Q96JM3 812 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 REEP2Q9BRK0 252 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 CUEDC2Q9H467 287 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 ZNF576Q9H609 170 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 KMT5AQ9NQR1 393 aa16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 LARSQ9P2J5 1176 aaKnown RBP16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
IGHV3-53-201ENST00000390627 NPHP3-ACAD11A0A0J9YXS1 232 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 HOXA2O43364 376 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 DGKIO75912 1065 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 SMTNP53814 917 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 AMHR2Q16671 573 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 ADALQ6DHV7 355 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 CRIPAKQ8N1N5 446 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 IQUBQ8NA54 791 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 SPIRE2Q8WWL2 714 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 DHX58Q96C10 678 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 KIFC3Q9BVG8 833 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 PANK2Q9BZ23 570 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 FZD8Q9H461 694 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 ADGRA3Q8IWK6 1321 aa16.59■□□□□ 0.25
IGHV3-53-201ENST00000390627 LCHNA4D1U4 455 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 SFI1A8K8P3 1242 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 H0YCG3 227 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 EOMESO95936 686 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 PRKCBP05771 671 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 ARF4P18085 180 aaPredicted RBP16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 HOXA11P31270 313 aaPredicted RBP16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 GIT2Q14161 759 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 CMTR2Q8IYT2 770 aaKnown RBP16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 DEFB123Q8N688 67 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 ZNF689Q96CS4 500 aaPredicted RBP16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 LRRC27Q9C0I9 530 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 CCDC113Q9H0I3 377 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 TNMDQ9H2S6 317 aa16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 TTYH1Q9H313 450 aaPredicted RBP16.58■□□□□ 0.24
IGHV3-53-201ENST00000390627 TMEM134Q9H6X4 195 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms