RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CD93Q9NPY3 652 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 TCF7L2Q9NQB0 619 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 KCND1Q9NSA2 647 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PRR13Q9NZ81 148 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 DTLQ9NZJ0 730 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 TRPM5Q9NZQ8 1165 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 COL20A1Q9P218 1284 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 STIM2Q9P246 746 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF282Q9UDV7 671 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 TJP2Q9UDY2 1190 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 FOXD3Q9UJU5 478 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 FBXO10Q9UK96 956 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PADI4Q9UM07 663 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 DMTF1Q9Y222 760 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF652Q9Y2D9 606 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 SIT1Q9Y3P8 196 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 PCDHGB1Q9Y5G3 927 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 FPGT-TNNI3KV9GXZ4 949 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 ARHGEF17Q96PE2 2063 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 MEGF8Q7Z7M0 2845 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 CACNA1IQ9P0X4 2223 aa-0.11□□□□□ -2.43
TRAJ28-201ENST00000390509 COL11A2P13942 1736 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TRBV23OR9-2A0A075B6M9 112 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KIR2DL5BA0A0G2JN68 375 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KIR2DL5BA0A0G2JPC4 375 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ESYT3A0FGR9 886 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DENND3A2RUS2 1198 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PRAMEF22A3QJZ6 481 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MARCH11A6NNE9 402 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SMTNL1A8MU46 457 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 AHRRA9YTQ3 701 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 USP17L10C9JJH3 530 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DIRC3C9JPN6 131 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 J3KR12 359 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MEIS1O00470 390 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SGSM2O43147 1006 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 NPHS1O60500 1241 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 LGR5O75473 907 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 BCAR3O75815 825 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KRT36O76013 467 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 LRG1P02750 347 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ALDH2P05091 517 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 THBDP07204 575 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CD48P09326 243 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ZBTB48P10074 688 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CYP2D6P10635 497 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PRF1P14222 555 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PKMP14618 531 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ANOS1P23352 680 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SP100P23497 879 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SSFA2P28290 1259 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MZF1P28698 734 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 USP5P45974 858 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 NOP2P46087 812 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KCNJ4P48050 445 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GLRBP48167 497 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 HOXA1P49639 335 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MRE11P49959 708 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KCNQ1P51787 676 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PGGT1BP53609 377 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SLC8A3P57103 927 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PHC1P78364 1004 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DSC2Q02487 901 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 POU3F1Q03052 451 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TFF2Q03403 129 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 EGR4Q05215 589 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RAD51AP2Q09MP3 1159 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TEFQ10587 303 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 GRIK2Q13002 908 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SNW1Q13573 536 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 PEX6Q13608 980 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SAFB2Q14151 953 aaKnown RBP eCLIP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RBMS2Q15434 407 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SHHQ15465 462 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SF1Q15637 639 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 SKIDA1Q1XH10 827 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 IZUMO4Q1ZYL8 232 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KIF26BQ2KJY2 2108 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KIZQ2M2Z5 673 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 WASHC4Q2M389 1173 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TRIM71Q2Q1W2 868 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP21-1Q3LI58 79 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 WDR72Q3MJ13 1102 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF718Q3SXZ3 478 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM153CQ494X1 144 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CEP78Q5JTW2 689 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 TCTE1Q5JU00 501 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 HABP4Q5JVS0 413 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 CFAP70Q5T0N1 1121 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 MROH9Q5TGP6 573 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 EEF1DP3Q658K8 133 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 LARP1BQ659C4 914 aaKnown RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 RCSD1Q6JBY9 416 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ZNF343Q6P1L6 599 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 ABHD15Q6UXT9 468 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DPP8Q6V1X1 898 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 LBX2Q6XYB7 198 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 DTHD1Q6ZMT9 781 aa-0.12□□□□□ -2.43
TRAJ28-201ENST00000390509 COLCA1Q6ZS62 124 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms