RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 STAT2P52630 851 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 ERMARDQ5T6L9 678 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 EGFL6Q8IUX8 553 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 KSR1Q8IVT5 923 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 TPH2Q8IWU9 490 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 CNKSR1Q969H4 720 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 TRIM51Q9BSJ1 452 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 ABCF3Q9NUQ8 709 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 TRPC6Q9Y210 931 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 A8MUI8 341 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 F8VZ95 297 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 CLSTN1O94985 981 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 FOSP01100 380 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 PAEPP09466 180 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 GHRP10912 638 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 EPS15P42566 896 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 SLC8A3P57103 927 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 SLC18A3Q16572 532 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 ARMC2Q8NEN0 867 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 SCFD2Q8WU76 684 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 GLIS2Q9BZE0 524 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 LUC7LQ9NQ29 371 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 FBXO28Q9NVF7 368 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 PITPNM2Q9BZ72 1349 aa19.14■□□□□ 0.65
SQSTM1-202ENST00000389805 IGLV3-22A0A075B6J6 115 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 IRX1P78414 480 aaPredicted RBP19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 ZKSCAN8Q15776 578 aaPredicted RBP19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 KNOP1Q1ED39 458 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 BTNL9Q6UXG8 535 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 MAEAQ7L5Y9 396 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 ARMC9Q7Z3E5 817 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 METTL13Q8N6R0 699 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 FAM20AQ96MK3 541 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 SPAG5Q96R06 1193 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 EBF2Q9HAK2 575 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 RBAK-RBAKDNI3L0D1 243 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 TBX3O15119 743 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 AKAP3O75969 853 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 COPB2P35606 906 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 GRIK3Q13003 919 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 KIF2BQ8N4N8 673 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 MAB21L3Q8N8X9 362 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 ZNF570Q96NI8 536 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 FAM129AQ9BZQ8 928 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 HDAC9Q9UKV0 1011 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 ATRNL1Q5VV63 1379 aa19.13■□□□□ 0.65
SQSTM1-202ENST00000389805 GCNT3O95395 438 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 CIITAP33076 1130 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 DCAF17Q5H9S7 520 aaPredicted RBP19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 FOXR2Q6PJQ5 311 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 CCDC113Q9H0I3 377 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 SPDYE2BA6NHP3 402 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 GNA14O95837 355 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 SPDYE6P0CI01 402 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 MTMR3Q13615 1198 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 TCERG1LQ5VWI1 586 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 PRMT1Q99873 361 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 FAM167BQ9BTA0 163 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 TMEM39BQ9GZU3 492 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 STK38LQ9Y2H1 464 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 RABGAP1Q9Y3P9 1069 aa19.12■□□□□ 0.65
SQSTM1-202ENST00000389805 MARSP56192 900 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 ZC2HC1CQ53FD0 456 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 DYDC2Q96IM9 177 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 ZNF317Q96PQ6 595 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 PGRMC1O00264 195 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 BRD2P25440 801 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 NMT1P30419 496 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 INHBEP58166 350 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 EDRF1Q3B7T1 1238 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 P3H4Q92791 437 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 ZBTB10Q96DT7 871 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 YIPF3Q9GZM5 350 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 ZNF277Q9NRM2 450 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 ARMCX3Q9UH62 379 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 PCDHB13Q9Y5F0 798 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 SLITRK3O94933 977 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 IFI35P80217 286 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 CAPRIN2Q6IMN6 1127 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 RINT1Q6NUQ1 792 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 EPM2AIP1Q7L775 607 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 OTOP1Q7RTM1 612 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 PARD3BQ8TEW8 1205 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 EDEM3Q9BZQ6 932 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 GANQ9H2C0 597 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 ZNF70Q9UC06 446 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 SLC12A4Q9UP95 1085 aa19.11■□□□□ 0.65
SQSTM1-202ENST00000389805 CALRP27797 417 aaKnown RBP19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 TRPM8Q7Z2W7 1104 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 SAMD15Q9P1V8 674 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 WRAP73Q9P2S5 460 aaPredicted RBP19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 TRAF3IP3Q9Y228 551 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 NR2E1Q9Y466 385 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 UBOX5O94941 541 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 SLCO1A2P46721 670 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 UBAP2Q5T6F2 1119 aaKnown RBP19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 GJB7Q6PEY0 223 aa19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 ZC3H3Q8IXZ2 948 aaKnown RBP19.1■□□□□ 0.65
SQSTM1-202ENST00000389805 HSD17B14Q9BPX1 270 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms