RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 IRAK1P51617 712 aa13.31□□□□□ -0.28
FANCA-202ENST00000389301 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
FANCA-202ENST00000389301 KIAA2013Q8IYS2 634 aa13.31□□□□□ -0.28
FANCA-202ENST00000389301 TRIM51Q9BSJ1 452 aa13.31□□□□□ -0.28
FANCA-202ENST00000389301 TRABDQ9H4I3 376 aa13.31□□□□□ -0.28
FANCA-202ENST00000389301 CPSF3Q9UKF6 684 aaKnown RBP13.31□□□□□ -0.28
FANCA-202ENST00000389301 F5H423 210 aaPredicted RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 PPP1R12AO14974 1030 aaPredicted RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 SEC24DO94855 1032 aaPredicted RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 CDK8P49336 464 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 NSUN2Q08J23 767 aaKnown RBP eCLIP13.3□□□□□ -0.28
FANCA-202ENST00000389301 MED21Q13503 144 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 SURF1Q15526 300 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 HNRNPCL2B2RXH8 293 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 HNRNPCL1O60812 293 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 STAT4Q14765 748 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 TMEM270Q6UE05 265 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 DGKHQ86XP1 1220 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 WDR19Q8NEZ3 1342 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 ADGBQ8N7X0 1667 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 FCER1AP12319 257 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 FMR1Q06787 632 aaKnown RBP eCLIP13.3□□□□□ -0.282e-8■■■■□ 21.5
FANCA-202ENST00000389301 CAPRIN1Q14444 709 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 LRRC8EQ6NSJ5 796 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 KIF2BQ8N4N8 673 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 XXYLT1Q8NBI6 393 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 RNF217Q8TC41 542 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 GFM2Q969S9 779 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 PSAPP07602 524 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 CNGA3Q16281 694 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 LONRF1Q17RB8 773 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 CATSPER1Q8NEC5 780 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 THAP11Q96EK4 314 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 RPF1Q9H9Y2 349 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 ASNSD1Q9NWL6 643 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
FANCA-202ENST00000389301 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
FANCA-202ENST00000389301 CALB1P05937 261 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 KIAA1755Q5JYT7 1200 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 OLFML2BQ68BL8 750 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 CATSPER3Q86XQ3 398 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 DNAJC9Q8WXX5 260 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 ALDH8A1Q9H2A2 487 aaPredicted RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 CD248Q9HCU0 757 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 SLC12A6Q9UHW9 1150 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 DBR1Q9UK59 544 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 AARSP49588 968 aaKnown RBP eCLIP13.29□□□□□ -0.28
FANCA-202ENST00000389301 SEC24CP53992 1094 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 AP1B1Q10567 949 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 SMARCAL1Q9NZC9 954 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 CLRN2A0PK11 232 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 POTECB2RU33 542 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 GOLGA8RI6L899 631 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 KRT4P19013 534 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 ANKRD40Q6AI12 368 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 SLFN12LQ6IEE8 588 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 AGR3Q8TD06 166 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 SCG3Q8WXD2 468 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 ZIM3Q96PE6 472 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 LCMT1Q9UIC8 334 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 K7ERI5 159 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 NOP9Q86U38 636 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 NLRP10Q86W26 655 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 ANKMY2Q8IV38 441 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.283e-7■■□□□ 14.1
FANCA-202ENST00000389301 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 PCSK1NQ9UHG2 260 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 PMS1P54277 932 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 ERFEQ4G0M1 354 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 AGBL2Q5U5Z8 902 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 RWDD4Q6NW29 188 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 GUF1Q8N442 669 aaKnown RBP13.29□□□□□ -0.28
FANCA-202ENST00000389301 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 CPVLQ9H3G5 476 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 FAM8A1Q9UBU6 413 aa13.29□□□□□ -0.28
FANCA-202ENST00000389301 CYP2D6P10635 497 aa13.28□□□□□ -0.28
FANCA-202ENST00000389301 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms