RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 ZNF623O75123 536 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 OFD1O75665 1012 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 RFX1P22670 979 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 SLC11A1P49279 550 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 RAB27AP51159 221 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 PFKFB3Q16875 520 aaPredicted RBP24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 DGLUCYQ7Z3D6 616 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 REXO1Q8N1G1 1221 aaKnown RBP24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 CMASQ8NFW8 434 aaPredicted RBP24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 C6orf50Q9HD87 102 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 FAM105AQ9NUU6 356 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 DNAJB4Q9UDY4 337 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 BRPF3Q9ULD4 1205 aa24.07■■□□□ 1.44
CNEP1R1-201ENST00000389134 EPG5Q9HCE0 2579 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 SPTBN2O15020 2390 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 NARSO43776 548 aaKnown RBP24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 CNPP09543 421 aaKnown RBP24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 SFNP31947 248 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 TARBP2Q15633 366 aaKnown RBP24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 LONRF3Q496Y0 759 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 CYP26C1Q6V0L0 522 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 CCDC12Q8WUD4 166 aaPredicted RBP24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 STAMQ92783 540 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 NXPE3Q969Y0 559 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 PGBD4Q96DM1 585 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 GBP3Q9H0R5 595 aa24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 MRPL17Q9NRX2 175 aaKnown RBP24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 PIN4Q9Y237 131 aaKnown RBP24.06■■□□□ 1.44
CNEP1R1-201ENST00000389134 DOCK6Q96HP0 2047 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 A0A087WZ62 844 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 KRBA1A5PL33 1030 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 GOLGA8AA7E2F4 631 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 GOLGA8BA8MQT2 603 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 LILRB3O75022 631 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 CFHP08603 1231 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 DNM2P50570 870 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 DRP2Q13474 957 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 ELMSAN1Q6PJG2 1045 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 LENG9Q96B70 501 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 FDXACB1Q9BRP7 624 aaPredicted RBP24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 RHOBTB2Q9BYZ6 727 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 FAM217BQ9NTX9 383 aaPredicted RBP24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 DPP7Q9UHL4 492 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 MIA3Q5JRA6 1907 aa24.05■■□□□ 1.44
CNEP1R1-201ENST00000389134 MED19A0JLT2 244 aaPredicted RBP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 ALDH2P05091 517 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 SSBP05455 408 aaKnown RBP eCLIP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 GNA11P29992 359 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 JAK3P52333 1124 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 RCAN1P53805 252 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 EXOSC10Q01780 885 aaKnown RBP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 PUM1Q14671 1186 aaKnown RBP eCLIP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 UGCGQ16739 394 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 RNF20Q5VTR2 975 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 ZC3H14Q6PJT7 736 aaKnown RBP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 ZNF410Q86VK4 478 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 KIAA2013Q8IYS2 634 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 URGCPQ8TCY9 931 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 RIT2Q99578 217 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 NIFKQ9BYG3 293 aaKnown RBP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 WDR6Q9NNW5 1121 aaKnown RBP24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 R4GN57 208 aa24.04■■□□□ 1.44
CNEP1R1-201ENST00000389134 MEIS3P2A8K0S8 358 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 N4BP1O75113 896 aaKnown RBP24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 CDC27P30260 824 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 GBP2P32456 591 aaPredicted RBP24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 DHX32Q7L7V1 743 aaKnown RBP24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 ZNF280BQ86YH2 543 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 SLC44A3Q8N4M1 653 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 FAM193BQ96PV7 902 aaPredicted RBP24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 TMEM175Q9BSA9 504 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 ESYT1Q9BSJ8 1104 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 TBC1D17Q9HA65 648 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 MAN1C1Q9NR34 630 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 KANSL3Q9P2N6 904 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 EPS15L1Q9UBC2 864 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 SSX2IPQ9Y2D8 614 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 FAN1Q9Y2M0 1017 aa24.03■■□□□ 1.44
CNEP1R1-201ENST00000389134 TDRD15B5MCY1 1934 aaKnown RBP24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 IGKV6-21A0A0C4DH24 114 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 CCDC195A0A1B0GUA6 201 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 MSH4O15457 936 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 GAS7O60861 476 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 SRFP11831 508 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 MTERF2Q49AM1 385 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 CATSPER4Q7RTX7 472 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 RSAD2Q8WXG1 361 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 SEPT9Q9UHD8 586 aaPredicted RBP24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 CA14Q9ULX7 337 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 GPR179Q6PRD1 2367 aa24.02■■□□□ 1.44
CNEP1R1-201ENST00000389134 KLF18A0A0U1RQI7 1052 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 CCDC196A0A1B0GTZ2 297 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 ADAMTS3O15072 1205 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 CHMP2AO43633 222 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 B4GALT3O60512 393 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 ADH1AP07327 375 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 XKR3Q5GH77 459 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 PHLDB3Q6NSJ2 640 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 RDM1Q8NG50 284 aa24.01■■□□□ 1.43
CNEP1R1-201ENST00000389134 BICD2Q8TD16 824 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms