RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 RGMAQ96B86 450 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 DCLRE1CQ96SD1 692 aaKnown RBP2.38□□□□□ -2.03
SNORA40-201ENST00000388090 NELL2Q99435 816 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 PDCD2LQ9BRP1 358 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 TEX101Q9BY14 249 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 SMURF1Q9HCE7 757 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 MTMR4Q9NYA4 1195 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 ASB1Q9Y576 335 aa2.38□□□□□ -2.03
SNORA40-201ENST00000388090 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 PRR23D1E9PI22 279 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 HOXA3O43365 443 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 SPDEFO95238 335 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 NTN1O95631 604 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 BMP15O95972 392 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 CFBP00751 764 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 PRR23D2P0DMB1 279 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 PYGMP11217 842 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 ZSCAN20P17040 1043 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 DDX6P26196 483 aaKnown RBP eCLIP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 GJA8P48165 433 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 SSBP2P81877 361 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 PAK1Q13153 545 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 FSTL4Q6MZW2 842 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 ZNF654Q8IZM8 581 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 HIPK4Q8NE63 616 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 OR5AN1Q8NGI8 311 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 PCDH19Q8TAB3 1148 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 ANAPC16Q96DE5 110 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 ZNF48Q96MX3 618 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 FCRL4Q96PJ5 515 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 PPP1R10Q96QC0 940 aaKnown RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 CPPED1Q9BRF8 314 aaPredicted RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 LSM14BQ9BX40 385 aaKnown RBP2.37□□□□□ -2.03
SNORA40-201ENST00000388090 ENKD1Q9H0I2 346 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 KLK15Q9H2R5 256 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 CATSPERZQ9NTU4 200 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 FOXJ2Q9P0K8 574 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 NCDNQ9UBB6 729 aa2.37□□□□□ -2.03
SNORA40-201ENST00000388090 MARCH11A6NNE9 402 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 FOXP2O15409 715 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 MTSS1O43312 755 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 KIR2DL3P43628 341 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 ALDH6A1Q02252 535 aaKnown RBP2.36□□□□□ -2.03
SNORA40-201ENST00000388090 SCAPQ12770 1279 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 LARP1BQ659C4 914 aaKnown RBP2.36□□□□□ -2.03
SNORA40-201ENST00000388090 ATG9BQ674R7 924 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 EP400NLQ6ZTU2 488 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 C16orf59Q7L2K0 433 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 PLXDC1Q8IUK5 500 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 NOSTRINQ8IVI9 506 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 GLB1L3Q8NCI6 653 aaPredicted RBP2.36□□□□□ -2.03
SNORA40-201ENST00000388090 GIPC2Q8TF65 315 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 DDB2Q92466 427 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 DPF1Q92782 380 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 FBXW5Q969U6 566 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 FOXRED1Q96CU9 486 aaPredicted RBP2.36□□□□□ -2.03
SNORA40-201ENST00000388090 BACH2Q9BYV9 841 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 EPN3Q9H201 632 aa2.36□□□□□ -2.03
SNORA40-201ENST00000388090 ARPP21Q9UBL0 812 aaPredicted RBP2.36□□□□□ -2.03
SNORA40-201ENST00000388090 AGRPO00253 132 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 SMAD7O15105 426 aaKnown RBP2.35□□□□□ -2.03
SNORA40-201ENST00000388090 PRODHO43272 600 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 DNAJC6O75061 913 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 DDAH1O94760 285 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 RASGRP1O95267 797 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 FGFR1P11362 822 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 TKTP29401 623 aaKnown RBP2.35□□□□□ -2.03
SNORA40-201ENST00000388090 PTGER1P34995 402 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 RNASE9P60153 205 aaKnown RBP2.35□□□□□ -2.03
SNORA40-201ENST00000388090 DGKDQ16760 1214 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 KRTAP27-1Q3LI81 207 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 ZNF326Q5BKZ1 582 aaKnown RBP2.35□□□□□ -2.03
SNORA40-201ENST00000388090 DLK2Q6UY11 383 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 RTN4RL1Q86UN2 441 aaPredicted RBP2.35□□□□□ -2.03
SNORA40-201ENST00000388090 SYT12Q8IV01 421 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 SEC16BQ96JE7 1060 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 WDR92Q96MX6 357 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 BCL2L13Q9BXK5 485 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 ALOXE3Q9BYJ1 711 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 C14orf93Q9H972 538 aaKnown RBP2.35□□□□□ -2.03
SNORA40-201ENST00000388090 KCNH7Q9NS40 1196 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 TRAF6Q9Y4K3 522 aa2.35□□□□□ -2.03
SNORA40-201ENST00000388090 SCDO00767 359 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 ITGAMP11215 1152 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 PABPC1P11940 636 aaKnown RBP2.34□□□□□ -2.03
SNORA40-201ENST00000388090 SDHAP31040 664 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 LACTBP83111 547 aaPredicted RBP2.34□□□□□ -2.03
SNORA40-201ENST00000388090 HSP90AA2PQ14568 343 aaPredicted RBP2.34□□□□□ -2.03
SNORA40-201ENST00000388090 EZH2Q15910 746 aaKnown RBP2.34□□□□□ -2.03
SNORA40-201ENST00000388090 CRY1Q16526 586 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 PDCD4Q53EL6 469 aaKnown RBP2.34□□□□□ -2.03
SNORA40-201ENST00000388090 CATSPEREQ5SY80 951 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 PIK3R6Q5UE93 754 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 KIAA1614Q5VZ46 1190 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 BTNL9Q6UXG8 535 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 EEPD1Q7L9B9 569 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 FAM83AQ86UY5 434 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 DLG3Q92796 817 aa2.34□□□□□ -2.03
SNORA40-201ENST00000388090 PDLIM2Q96JY6 352 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms