RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CDY2AQ9Y6F7 541 aa4.49□□□□□ -1.69
RNU6-39P-201ENST00000384344 PMS2P1A4D2B8 440 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 LPLP06858 475 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 HNRNPLP14866 589 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 ATP2C1P98194 919 aaPredicted RBP4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 MGAT5Q09328 741 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 PDCD1Q15116 288 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 CLUL1Q15846 466 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 SYDE2Q5VT97 1194 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 LILRA6Q6PI73 481 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 CLEC14AQ86T13 490 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 TGFBRAP1Q8WUH2 860 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 LMBR1Q8WVP7 490 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 RABGGTAQ92696 567 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 QRSL1Q9H0R6 528 aaKnown RBP4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 DNAJC28Q9NX36 388 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 DPP7Q9UHL4 492 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 EDARQ9UNE0 448 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 ADAMTS20P59510 1910 aa4.48□□□□□ -1.69
RNU6-39P-201ENST00000384344 A0A1W2PRX2 142 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 SEC24DO94855 1032 aaPredicted RBP4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 ITGB3P05106 788 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 VSIG10L2P0DP72 767 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 KIR2DL3P43628 341 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 HHEXQ03014 270 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 TAX1BP1Q86VP1 789 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 ANKRD53Q8N9V6 530 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 SHCBP1Q8NEM2 672 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 CHST13Q8NET6 341 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 LOXL4Q96JB6 756 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 DPYSL5Q9BPU6 564 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 VTA1Q9NP79 307 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 PPP4R1LQ9P1A2 415 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 TRHDEQ9UKU6 1024 aa4.47□□□□□ -1.69
RNU6-39P-201ENST00000384344 A0A0A6YYK5 440 aaPredicted RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 SHTN1A0MZ66 631 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 MTSS1O43312 755 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 FOXD2O60548 495 aaPredicted RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 PRAMEF4O60810 478 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 KATNA1O75449 491 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ALDH1A2O94788 518 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 TOX4O94842 621 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 LTA4HP09960 611 aaKnown RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 GAAP10253 952 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 CCND1P24385 295 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ADCY7P51828 1080 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 NPEPPSP55786 919 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 WNT3AP56704 352 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ERVK-21P61565 698 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 CDK17Q00537 523 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 SRSF2Q01130 221 aaKnown RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 HGFACQ04756 655 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 TRIM25Q14258 630 aaKnown RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 TBR1Q16650 682 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 MUM1Q2TAK8 710 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ANO4Q32M45 955 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 TOR2AQ5JU69 321 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 GAREM2Q75VX8 874 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 FATE1Q969F0 183 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ARL8AQ96BM9 186 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 GPATCH3Q96I76 525 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 RPL10LQ96L21 214 aaKnown RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 SAMD11Q96NU1 681 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 OR14A2Q96R54 314 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ORAI2Q96SN7 254 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 SOX7Q9BT81 388 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 ACE2Q9BYF1 805 aaPredicted RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 MEGF9Q9H1U4 602 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 IFT122Q9HBG6 1241 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 CCM2LQ9NUG4 571 aaPredicted RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 TYW1Q9NV66 732 aaKnown RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 NCDNQ9UBB6 729 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 EVLQ9UI08 416 aaPredicted RBP4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 TMPRSS11EQ9UL52 423 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 SPEF1Q9Y4P9 236 aa4.46□□□□□ -1.7
RNU6-39P-201ENST00000384344 C2orf78A6NCI8 922 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 PHF2O75151 1096 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 LY86O95711 162 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 MYBL2P10244 700 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 GPR3P46089 330 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 DUSP2Q05923 314 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 CD69Q07108 199 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 MTMR1Q13613 665 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 RIN1Q13671 783 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 ACAP2Q15057 778 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 MUM1L1Q5H9M0 696 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 MBNL2Q5VZF2 373 aaKnown RBP4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 BTNL9Q6UXG8 535 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 LIMS2Q7Z4I7 341 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 PNMA8AQ86V59 439 aaPredicted RBP4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 TTC9BQ8N6N2 239 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 PPP1R14CQ8TAE6 165 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 C20orf173Q96LM9 149 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 GNRHR2Q96P88 292 aa4.45□□□□□ -1.7
RNU6-39P-201ENST00000384344 ADI1Q9BV57 179 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms