RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TFDP1Q14186 410 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 ARSHQ5FYA8 562 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 ODR4Q5SWX8 454 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 LINC01599Q8WXQ3 324 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 DHX58Q96C10 678 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 YME1L1Q96TA2 773 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 MINDY3Q9H8M7 445 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 FAM13BQ9NYF5 915 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 ST3GAL5Q9UNP4 418 aa17.9■□□□□ 0.46
SNRPB-201ENST00000381342 MGEA5O60502 916 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 UPP2O95045 317 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 E2F4Q16254 413 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 TMCO2Q7Z6W1 182 aaPredicted RBP17.89■□□□□ 0.45
SNRPB-201ENST00000381342 KIFAP3Q92845 792 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 REEP2Q9BRK0 252 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 TMX1Q9H3N1 280 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 MYO9BQ13459 2157 aa17.89■□□□□ 0.45
SNRPB-201ENST00000381342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.88■□□□□ 0.45
SNRPB-201ENST00000381342 GPR182O15218 404 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 PFKFB1P16118 471 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 SFPQP23246 707 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNRPB-201ENST00000381342 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 MICALL1Q8N3F8 863 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 TOP1MTQ969P6 601 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 DRC1Q96MC2 740 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 TGS1Q96RS0 853 aaKnown RBP17.88■□□□□ 0.45
SNRPB-201ENST00000381342 KIFC3Q9BVG8 833 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 TIPINQ9BVW5 301 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 FTHL17Q9BXU8 183 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 KCND2Q9NZV8 630 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 ADGRA3Q8IWK6 1321 aa17.88■□□□□ 0.45
SNRPB-201ENST00000381342 A0A1B0GVL5 298 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 POLR2DO15514 142 aaKnown RBP17.87■□□□□ 0.45
SNRPB-201ENST00000381342 KRT18P05783 430 aaKnown RBP17.87■□□□□ 0.45
SNRPB-201ENST00000381342 CMA1P23946 247 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 NAMPTP43490 491 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 PTENP60484 403 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 ADGRE1Q14246 886 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 PPP2R5AQ15172 486 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 CCDC85BQ15834 202 aaPredicted RBP17.87■□□□□ 0.45
SNRPB-201ENST00000381342 CDCA2Q69YH5 1023 aaPredicted RBP17.87■□□□□ 0.45
SNRPB-201ENST00000381342 FAM43BQ6ZT52 329 aaPredicted RBP17.87■□□□□ 0.45
SNRPB-201ENST00000381342 CATSPER4Q7RTX7 472 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 SRGAP1Q7Z6B7 1085 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 IFNLR1Q8IU57 520 aaPredicted RBP17.87■□□□□ 0.45
SNRPB-201ENST00000381342 IFT74Q96LB3 600 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 GOLPH3LQ9H4A5 285 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 KCNH3Q9ULD8 1083 aa17.87■□□□□ 0.45
SNRPB-201ENST00000381342 MYMKA6NI61 221 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 SFI1A8K8P3 1242 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 INO80B-WBP1J3KQ70 363 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 PEX3P56589 373 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 MBTD1Q05BQ5 628 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 POU5F1BQ06416 359 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 SV2BQ7L1I2 683 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 DYMQ7RTS9 669 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 IQUBQ8NA54 791 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 DEPTORQ8TB45 409 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
SNRPB-201ENST00000381342 STAMQ92783 540 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 SAMD11Q96NU1 681 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 INO80BQ9C086 356 aaPredicted RBP17.86■□□□□ 0.45
SNRPB-201ENST00000381342 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
SNRPB-201ENST00000381342 ODF2LQ9ULJ1 636 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 PIN4Q9Y237 131 aaKnown RBP17.86■□□□□ 0.45
SNRPB-201ENST00000381342 TTC3P53804 2025 aa17.86■□□□□ 0.45
SNRPB-201ENST00000381342 A0A1W2PQ27 194 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 A0A1W2PQ64 194 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 A0A1W2PQD8 194 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 DENND3A2RUS2 1198 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 LCHNA4D1U4 455 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 LINC01553A4QN01 128 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 CCDC169A6NNP5 214 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 RFXAPO00287 272 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 DLL1O00548 723 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 ENPP3O14638 875 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 TBCAO75347 108 aaKnown RBP17.85■□□□□ 0.45
SNRPB-201ENST00000381342 IBSPP21815 317 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-201ENST00000381342 NPTX2P47972 431 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 DMP1Q13316 513 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-201ENST00000381342 COL4A6Q14031 1691 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 GIT2Q14161 759 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 DSC3Q14574 896 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 SKIV2LQ15477 1246 aaKnown RBP17.85■□□□□ 0.45
SNRPB-201ENST00000381342 RTN4RL1Q86UN2 441 aaPredicted RBP17.85■□□□□ 0.45
SNRPB-201ENST00000381342 ZBTB8OSQ8IWT0 167 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 DDX12PQ92771 950 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 ADAM2Q99965 735 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 NFKBIZQ9BYH8 718 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 CUEDC2Q9H467 287 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 MTUS1Q9ULD2 1270 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 HPSEQ9Y251 543 aa17.85■□□□□ 0.45
SNRPB-201ENST00000381342 TSPAN1O60635 241 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 ERLIN2O94905 339 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 FAM13AO94988 1023 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 STAG3L1P0CL83 205 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 PLS3P13797 630 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 LIG1P18858 919 aa17.84■□□□□ 0.45
SNRPB-201ENST00000381342 NDUFA8P51970 172 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms