RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LINC01565O15544 149 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 ZNF623O75123 536 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 CTDNEP1O95476 244 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 PHKA2P46019 1235 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 ALDH7A1P49419 539 aaKnown RBP14.52□□□□□ -0.08
RPAIN-202ENST00000381208 DRP2Q13474 957 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 TRIM29Q14134 588 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 CLUL1Q15846 466 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 GLB1LQ6UWU2 654 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 TMEM184AQ6ZMB5 413 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 CATSPER4Q7RTX7 472 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 RBM23Q86U06 439 aaKnown RBP14.52□□□□□ -0.08
RPAIN-202ENST00000381208 RNF169Q8NCN4 708 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 HAS1Q92839 578 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 PGBD4Q96DM1 585 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 ZNF668Q96K58 619 aaPredicted RBP14.52□□□□□ -0.08
RPAIN-202ENST00000381208 TCF25Q9BQ70 676 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 LXNQ9BS40 222 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 DHX33Q9H6R0 707 aaKnown RBP14.52□□□□□ -0.08
RPAIN-202ENST00000381208 ENTPD7Q9NQZ7 604 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 CLEC1BQ9P126 229 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 PIN4Q9Y237 131 aaKnown RBP14.52□□□□□ -0.08
RPAIN-202ENST00000381208 COL4A3BPQ9Y5P4 624 aa14.52□□□□□ -0.08
RPAIN-202ENST00000381208 HOXB8P17481 243 aaPredicted RBP14.51□□□□□ -0.09
RPAIN-202ENST00000381208 ATF7P17544 494 aaPredicted RBP14.51□□□□□ -0.09
RPAIN-202ENST00000381208 YWHABP31946 246 aaKnown RBP14.51□□□□□ -0.09
RPAIN-202ENST00000381208 ERVFC1P60507 584 aa14.51□□□□□ -0.09
RPAIN-202ENST00000381208 ME3Q16798 604 aa14.51□□□□□ -0.09
RPAIN-202ENST00000381208 CLLU1OSQ5K130 101 aa14.51□□□□□ -0.09
RPAIN-202ENST00000381208 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
RPAIN-202ENST00000381208 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
RPAIN-202ENST00000381208 NLRP4Q96MN2 994 aa14.51□□□□□ -0.09
RPAIN-202ENST00000381208 TMEM150BA6NC51 233 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 FGFR4P22455 802 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 NEK4P51957 841 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 GIT2Q14161 759 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 MXD4Q14582 209 aaPredicted RBP14.5□□□□□ -0.09
RPAIN-202ENST00000381208 SMC1AQ14683 1233 aaKnown RBP14.5□□□□□ -0.09
RPAIN-202ENST00000381208 CALCRLQ16602 461 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 PLA2G4FQ68DD2 849 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 NCAPH2Q6IBW4 605 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 TMC7Q7Z402 723 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 SLC39A11Q8N1S5 342 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 HELQQ8TDG4 1101 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 FAM122AQ96E09 287 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 TMEM169Q96HH4 297 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 SH2D3AQ9BRG2 576 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 C11orf16Q9NQ32 467 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 AGPAT5Q9NUQ2 364 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 FAM105AQ9NUU6 356 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 PCDHA12Q9UN75 941 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 KIAA1671Q9BY89 1806 aa14.5□□□□□ -0.09
RPAIN-202ENST00000381208 PER2O15055 1255 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 CSDE1O75534 798 aaKnown RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 LYPLA2O95372 231 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 GLP2RO95838 553 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 FDPSP14324 419 aaKnown RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 PLA2G5P39877 138 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 NPEPPSP55786 919 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 SPIRE1Q08AE8 756 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 NCBP1Q09161 790 aaKnown RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 NR5A1Q13285 461 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 SAFBQ15424 915 aaKnown RBP eCLIP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 XKR9Q5GH70 373 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 HERC4Q5GLZ8 1057 aaPredicted RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 PLPP4Q5VZY2 271 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 CNNM3Q8NE01 707 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 NSUN7Q8NE18 718 aaKnown RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 CASP10Q92851 521 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 TNFRSF25Q93038 417 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 MTRQ99707 1265 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 PHF7Q9BWX1 381 aaPredicted RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 IFT122Q9HBG6 1241 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 UBN1Q9NPG3 1134 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 GJB4Q9NTQ9 266 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 KANSL3Q9P2N6 904 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 HCSTQ9UBK5 93 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 BARX2Q9UMQ3 279 aaPredicted RBP14.49□□□□□ -0.09
RPAIN-202ENST00000381208 CNTNAP2Q9UHC6 1331 aa14.49□□□□□ -0.09
RPAIN-202ENST00000381208 AXLP30530 894 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 BCAR1P56945 870 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 POU5F1BQ06416 359 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 LAMTOR4Q0VGL1 99 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 KCNC3Q14003 757 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 TFDP1Q14186 410 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 CBX2Q14781 532 aaPredicted RBP14.48□□□□□ -0.09
RPAIN-202ENST00000381208 EMC2Q15006 297 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 TPRNQ4KMQ1 711 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 NOMO2Q5JPE7 1267 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 DIS3L2Q8IYB7 885 aaKnown RBP14.48□□□□□ -0.09
RPAIN-202ENST00000381208 MRPL43Q8N983 215 aaKnown RBP14.48□□□□□ -0.09
RPAIN-202ENST00000381208 NECAB1Q8N987 351 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 URGCPQ8TCY9 931 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 PRPF31Q8WWY3 499 aaKnown RBP14.48□□□□□ -0.09
RPAIN-202ENST00000381208 CCDC51Q96ER9 411 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 DYDC2Q96IM9 177 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 CCDC43Q96MW1 224 aaKnown RBP14.48□□□□□ -0.09
RPAIN-202ENST00000381208 KCNH6Q9H252 994 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 ANKEF1Q9NU02 776 aa14.48□□□□□ -0.09
RPAIN-202ENST00000381208 RGL1Q9NZL6 768 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms