RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 OSBPL7Q9BZF2 842 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 SMIM23A6NLE4 172 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 SLITRK3O94933 977 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 CLSTN1O94985 981 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 PPP2R2AP63151 447 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 POU5F1Q01860 360 aaKnown RBP17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 MICALCLQ6ZW33 695 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 VPS36Q86VN1 386 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 BORCS6Q96GS4 357 aa17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 WRAP73Q9P2S5 460 aaPredicted RBP17.61■□□□□ 0.41
NKX3-1-201ENST00000380871 WNT10BO00744 389 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CAP2P40123 477 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 ARHGAP44Q17R89 818 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 SAMD7Q7Z3H4 446 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 FAM186BQ8IYM0 893 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 SLC30A5Q8TAD4 765 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CABS1Q96KC9 395 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 GPR88Q9GZN0 384 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 THAP2Q9H0W7 228 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 AMFRQ9UKV5 643 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 COG5Q9UP83 839 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 IGLV3-22A0A075B6J6 115 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CCDC188H7C350 402 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 DNM1LO00429 736 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 DDX3YO15523 660 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 VIL1P09327 827 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 EIF2AK2P19525 551 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 ACTN3Q08043 901 aaPredicted RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 BYSLQ13895 437 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 PRKG1Q13976 671 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 OTOP1Q7RTM1 612 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 IL31RAQ8NI17 732 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 ALG3Q92685 438 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CAMKK2Q96RR4 588 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 DNAJC12Q9UKB3 198 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 UTP11Q9Y3A2 253 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 MRPL11Q9Y3B7 192 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CAND2O75155 1236 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 STAT1P42224 750 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 CEP55Q53EZ4 464 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 BTNL9Q6UXG8 535 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 NSMFQ6X4W1 530 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 SYCP3Q8IZU3 236 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 ARFGAP2Q8N6H7 521 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 UHMK1Q8TAS1 419 aaKnown RBP17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 UNC45AQ9H3U1 944 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 PCIF1Q9H4Z3 704 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 PNMA2Q9UL42 364 aa17.6■□□□□ 0.41
NKX3-1-201ENST00000380871 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 SOX5P35711 763 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 MKRN4PQ13434 485 aaPredicted RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 ODR4Q5SWX8 454 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 WDR11Q9BZH6 1224 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 SLITRK6Q9H5Y7 841 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 ZNRF3Q9ULT6 936 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 EYA4O95677 639 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 MARCKSL1P49006 195 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 IFFO1Q0D2I5 559 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 YTHDF3Q7Z739 585 aaKnown RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 SPATS2Q86XZ4 545 aaKnown RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 EIF1ADQ8N9N8 165 aaKnown RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 CCDC26Q8TAB7 109 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 FMO2Q99518 471 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 RPL13P26373 211 aaKnown RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 BIRC3Q13489 604 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 JPH2Q9BR39 696 aaPredicted RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 EPB41L4BQ9H329 900 aa17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 METTL14Q9HCE5 456 aaKnown RBP17.59■□□□□ 0.41
NKX3-1-201ENST00000380871 ATRNL1Q5VV63 1379 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 TBX3O15119 743 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 FERP16591 822 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 BMT2Q1RMZ1 405 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 FAM178BQ8IXR5 827 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 GPATCH11Q8N954 259 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 SEC16BQ96JE7 1060 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 CEP89Q96ST8 783 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 COL20A1Q9P218 1284 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 SNX24Q9Y343 169 aa17.58■□□□□ 0.41
NKX3-1-201ENST00000380871 A0A0A6YYK5 440 aaPredicted RBP17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 ARHGEF35A5YM69 484 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 TISP43B9A030 160 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 SLC16A3O15427 465 aaKnown RBP17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 FMO5P49326 533 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 SYCE1Q8N0S2 351 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 SLC20A1Q8WUM9 679 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 RFFLQ8WZ73 363 aa17.58■□□□□ 0.4
NKX3-1-201ENST00000380871 SEC14L1Q92503 715 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms