RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ELOA2Q8IYF1 753 aaPredicted RBP13.98□□□□□ -0.17
SMN1-202ENST00000380707 TMEM199Q8N511 208 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 DEPTORQ8TB45 409 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 SPIRE2Q8WWL2 714 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 HPS3Q969F9 1004 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 CCDC34Q96HJ3 373 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 NFKBIZQ9BYH8 718 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 KMT5AQ9NQR1 393 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 TBC1D7Q9P0N9 293 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 SCN5AQ14524 2016 aa13.98□□□□□ -0.17
SMN1-202ENST00000380707 TANC1Q9C0D5 1861 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 PVALEFA0A1B0GWK0 134 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 TRAK2O60296 914 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 PARNO95453 639 aaKnown RBP13.97□□□□□ -0.17
SMN1-202ENST00000380707 CXCL10P02778 98 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 GAP43P17677 238 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 CD52P31358 61 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 RFC2P35250 354 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 SMTNP53814 917 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 MLLT1Q03111 559 aaPredicted RBP13.97□□□□□ -0.17
SMN1-202ENST00000380707 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 TSHZ1Q6ZSZ6 1077 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 FAM228AQ86W67 206 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 FAM178BQ8IXR5 827 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 TMEM161BQ8NDZ6 487 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 FGFBP2Q9BYJ0 223 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 PADI3Q9ULW8 664 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 SQORQ9Y6N5 450 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 PDE4DIPQ5VU43 2346 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 MYH11P35749 1972 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
SMN1-202ENST00000380707 H0YGN5 161 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 INO80B-WBP1J3KQ70 363 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 MBD3O95983 291 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 RPN1P04843 607 aaKnown RBP13.96□□□□□ -0.17
SMN1-202ENST00000380707 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
SMN1-202ENST00000380707 NCKAP1LP55160 1127 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 FPGSQ05932 587 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 EHHADHQ08426 723 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 KMT5BQ4FZB7 885 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 PLEKHG4Q58EX7 1191 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 C16orf59Q7L2K0 433 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 TAS1R3Q7RTX0 852 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 ZNF720Q7Z2F6 126 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 USP38Q8NB14 1042 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
SMN1-202ENST00000380707 INO80BQ9C086 356 aaPredicted RBP13.96□□□□□ -0.17
SMN1-202ENST00000380707 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 C2orf40Q9H1Z8 148 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 CLSTN2Q9H4D0 955 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 MRPL44Q9H9J2 332 aaKnown RBP13.96□□□□□ -0.17
SMN1-202ENST00000380707 OLFML3Q9NRN5 406 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 SEL1LQ9UBV2 794 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 KCNG1Q9UIX4 513 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 HOOK1Q9UJC3 728 aaKnown RBP13.96□□□□□ -0.17
SMN1-202ENST00000380707 TET1Q8NFU7 2136 aa13.96□□□□□ -0.17
SMN1-202ENST00000380707 K7ENM7 598 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 ACRP10323 421 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
SMN1-202ENST00000380707 CASP5P51878 434 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 EFNA5P52803 228 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 EPHB4P54760 987 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 NFX1Q12986 1120 aaKnown RBP13.95□□□□□ -0.18
SMN1-202ENST00000380707 PAK2Q13177 524 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
SMN1-202ENST00000380707 HAUS6Q7Z4H7 955 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 ZBTB8OSQ8IWT0 167 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 DBF4BQ8NFT6 615 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
SMN1-202ENST00000380707 FZD8Q9H461 694 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 ERVK-5Q9HDB9 667 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 IL23AQ9NPF7 189 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 USP20Q9Y2K6 914 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 K7ERI5 159 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 GPR182O15218 404 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 B4GALT5O43286 388 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 EDN1P05305 212 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMN1-202ENST00000380707 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
SMN1-202ENST00000380707 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMN1-202ENST00000380707 AMHR2Q16671 573 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 CATSPER4Q7RTX7 472 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 RPUSD2Q8IZ73 545 aaKnown RBP13.95□□□□□ -0.18
SMN1-202ENST00000380707 STRA6Q9BX79 667 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 TMX1Q9H3N1 280 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 TMEM134Q9H6X4 195 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
SMN1-202ENST00000380707 TSPAN1O60635 241 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 SMC2O95347 1197 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms