RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 PCDHGB6Q9Y5F9 930 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SMAD9O15198 467 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 DDX5P17844 614 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PPARGP37231 505 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CLK1P49759 484 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TUBA4AP68366 448 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 DIS3L2Q8IYB7 885 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 VPS50Q96JG6 964 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PSD2Q9BQI7 771 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 HAUS2Q9NVX0 235 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 RPS6KA6Q9UK32 745 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 LRCH1Q9Y2L9 728 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TIMM8BQ9Y5J9 83 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 LOC102724200A0A096LPH7 203 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 KANSL1LA0AUZ9 987 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TRIM64CA6NLI5 447 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 KHNYNO15037 678 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 KIAA0355O15063 1070 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 STX6O43752 255 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 AHCYL1O43865 530 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TMCC2O75069 709 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ATP2B4P23634 1241 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TALDO1P37837 337 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PPP3CCP48454 512 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SMCO1Q147U7 214 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ARID5BQ14865 1188 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SPANXN2Q5MJ10 180 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 MZT2BQ6NZ67 158 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 C1orf131Q8NDD1 294 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CALML4Q96GE6 196 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ERO1AQ96HE7 468 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ZFRQ96KR1 1074 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TUBB6Q9BUF5 446 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ABCB10Q9NRK6 738 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 GALNT8Q9NY28 637 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PFDN2Q9UHV9 154 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PSMD12O00232 456 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 IDEP14735 1019 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CHKAP35790 457 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SLC9A3P48764 834 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 MTTPP55157 894 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 AMPD3Q01432 767 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 FAM69CQ0P6D2 419 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PALB2Q86YC2 1186 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 MRPS27Q92552 414 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 RRNAD1Q96FB5 475 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 AIFM2Q9BRQ8 373 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 BTBD7Q9P203 1132 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ING4Q9UNL4 249 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 HSPA12AO43301 675 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 EXTL3O43909 919 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ZNF24P17028 368 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CTCFP49711 727 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TAF5Q15542 800 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CA9Q16790 459 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PIK3AP1Q6ZUJ8 805 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 DPH6Q7L8W6 267 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 NET1Q7Z628 596 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 WDR36Q8NI36 951 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 DNAJC1Q96KC8 554 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CITED4Q96RK1 184 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 NDUFA13Q9P0J0 144 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ZNF69Q9UC07 566 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SLC12A4Q9UP95 1085 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 A0A087WZG4 1122 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TMEM247A6NEH6 219 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 FAM47DPA6NHR8 397 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ILF3Q12906 894 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PDIA2Q13087 525 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 NFIXQ14938 502 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 TSHZ1Q6ZSZ6 1077 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 IGSF22Q8N9C0 903 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 MAIP1Q8WWC4 291 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ZNF224Q9NZL3 707 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 HIF3AQ9Y2N7 669 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 UBTFL6P0CB48 400 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 UBASH3AP57075 661 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SCRN1Q12765 414 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 NUP93Q8N1F7 819 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 YME1L1Q96TA2 773 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 KRT12Q99456 494 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 BEGAINQ9BUH8 593 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 DIDO1Q9BTC0 2240 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 EIF3DO15371 548 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SRSF11Q05519 484 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 LRRC74AQ0VAA2 488 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 KCTD2Q14681 263 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 ACAP1Q15027 740 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SHROOM1Q2M3G4 852 aaPredicted RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 RIC3Q7Z5B4 369 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 POMGNT2Q8NAT1 580 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 HDAC2Q92769 488 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PTCHD1Q96NR3 888 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PYM1Q9BRP8 204 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 PI4K2AQ9BTU6 479 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 SMYD3Q9H7B4 428 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.07□□□□□ -1.6
PTCD2-202ENST00000380639 CHPF2Q9P2E5 772 aa5.07□□□□□ -1.6
PTCD2-202ENST00000380639 MGAT4AQ9UM21 535 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms