RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SMIM24O75264 130 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 GJC1P36383 396 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ERICH1Q86X53 443 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ERMNQ8TAM6 284 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 KAT5Q92993 513 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 AIPL1Q9NZN9 384 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CORO1CQ9ULV4 474 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 SMCHD1A6NHR9 2005 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ARAP2Q8WZ64 1704 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CCT8L1PA6NM43 557 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 GNA14O95837 355 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 FGFR4P22455 802 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ECE1P42892 770 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CTCFP49711 727 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 EPC2Q52LR7 807 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CCDC127Q96BQ5 260 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 L3MBTL3Q96JM7 780 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 PAPOLBQ9NRJ5 636 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 STK38LQ9Y2H1 464 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 RPS6KL1Q9Y6S9 549 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CALUO43852 315 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 GCLMP48507 274 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 PAPOLAP51003 745 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 CD302Q8IX05 232 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 KIF2BQ8N4N8 673 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 POP1Q99575 1024 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 KDM4CQ9H3R0 1056 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 AGAP1Q9UPQ3 857 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
PRPF40B-202ENST00000380281 NEFHP12036 1026 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 RANBP1P43487 201 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 PPP2R2AP63151 447 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 DLG4P78352 724 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 JAG1P78504 1218 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 SP4Q02446 784 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 RPUSD2Q8IZ73 545 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 KRT35Q92764 455 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 IQCDQ96DY2 449 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 TSC22D3Q99576 134 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 OSBPL1AQ9BXW6 950 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 ISCUQ9H1K1 167 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 UBE2TQ9NPD8 197 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 GYS1P13807 737 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 DRD4P21917 467 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 GABPAQ06546 454 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 LAMB3Q13751 1172 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 ASTN1O14525 1302 aa13.43□□□□□ -0.26
PRPF40B-202ENST00000380281 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ATP4AP20648 1035 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 RPL13P26373 211 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ECHS1P30084 290 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ITIH3Q06033 890 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 EPHA7Q15375 998 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 DAB2IPQ5VWQ8 1189 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 CCDC197Q8NCU1 140 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 LRRC45Q96CN5 670 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 FMO2Q99518 471 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 USP21Q9UK80 565 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 DPPA5A6NC42 116 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 NDUFB10O96000 172 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 IL1R1P14778 569 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 TNFRSF8P28908 595 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 IFI35P80217 286 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 SLC5A9Q2M3M2 681 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 FBXO25Q8TCJ0 367 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ALG3Q92685 438 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 USP20Q9Y2K6 914 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 TGFB1I1O43294 461 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 RTN3O95197 1032 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 CRKP46108 304 aa13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-202ENST00000380281 ALDH5A1P51649 535 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms