RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 MTMR3Q13615 1198 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 TOB2Q14106 344 aaPredicted RBP25.91■■□□□ 1.74
U2AF1-202ENST00000380276 INF2Q27J81 1249 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 LETM2Q2VYF4 491 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 KANK3Q6NY19 840 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 NRDE2Q9H7Z3 1164 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 TBC1D13Q9NVG8 400 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 DZANK1Q9NVP4 752 aa25.91■■□□□ 1.74
U2AF1-202ENST00000380276 DBR1Q9UK59 544 aaKnown RBP25.91■■□□□ 1.74
U2AF1-202ENST00000380276 CYP3A7-CYP3A51PA0A087WV96 503 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 IGKV6-21A0A0C4DH24 114 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 MEIS3P2A8K0S8 358 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 MAFO75444 373 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-202ENST00000380276 STBD1O95210 358 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 EPCAMP16422 314 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 CYP3A7P24462 503 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 RAB27AP51159 221 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 TDRD5Q8NAT2 981 aaKnown RBP25.9■■□□□ 1.74
U2AF1-202ENST00000380276 ETNPPLQ8TBG4 499 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 URGCPQ8TCY9 931 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 PGBD4Q96DM1 585 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 IGSF21Q96ID5 467 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 AIFM3Q96NN9 605 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 CEP89Q96ST8 783 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 BMP2KQ9NSY1 1161 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-202ENST00000380276 SORCS3Q9UPU3 1222 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 CYP46A1Q9Y6A2 500 aa25.9■■□□□ 1.74
U2AF1-202ENST00000380276 CARNS1A5YM72 827 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 CTSAP10619 480 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 EVCP57679 992 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 GIT2Q14161 759 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 ATAT1Q5SQI0 421 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 ANO5Q75V66 913 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 KRT25Q7Z3Z0 450 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 DDX53Q86TM3 631 aaKnown RBP25.89■■□□□ 1.74
U2AF1-202ENST00000380276 RSPH1Q8WYR4 309 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 ATOH1Q92858 354 aaPredicted RBP25.89■■□□□ 1.74
U2AF1-202ENST00000380276 DNAJB4Q9UDY4 337 aa25.89■■□□□ 1.74
U2AF1-202ENST00000380276 SLC37A4O43826 429 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 MARCH6O60337 910 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 OFD1O75665 1012 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 SSBP05455 408 aaKnown RBP eCLIP25.88■■□□□ 1.73
U2AF1-202ENST00000380276 GALTP07902 379 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 POLGP54098 1239 aaPredicted RBP25.88■■□□□ 1.73
U2AF1-202ENST00000380276 NPEPPSP55786 919 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 MOXD1Q6UVY6 613 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 B3GNT9Q6UX72 402 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 CABP7Q86V35 215 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 UBALD2Q8IYN6 164 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 DAGLBQ8NCG7 672 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 BCL7CQ8WUZ0 217 aaPredicted RBP25.88■■□□□ 1.73
U2AF1-202ENST00000380276 SLC7A3Q8WY07 619 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 CEP170P1Q96L14 293 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 FAM193BQ96PV7 902 aaPredicted RBP25.88■■□□□ 1.73
U2AF1-202ENST00000380276 TRAIPQ9BWF2 469 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 CYP26B1Q9NR63 512 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 KCNJ14Q9UNX9 436 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 COL4A3BPQ9Y5P4 624 aa25.88■■□□□ 1.73
U2AF1-202ENST00000380276 CCDC194A0A1B0GVG4 234 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 EML1O00423 815 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 DKC1O60832 514 aaKnown RBP eCLIP25.87■■□□□ 1.73
U2AF1-202ENST00000380276 BRD1O95696 1058 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 ASGR2P07307 311 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 QARSP47897 775 aaKnown RBP25.87■■□□□ 1.73
U2AF1-202ENST00000380276 SLC11A1P49279 550 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 GALNT17Q6IS24 598 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 KIAA1841Q6NSI8 718 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 TMC5Q6UXY8 1006 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 MBOAT7Q96N66 472 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 SMOC2Q9H3U7 446 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 ZSWIM6Q9HCJ5 1215 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 PCDHB2Q9Y5E7 798 aa25.87■■□□□ 1.73
U2AF1-202ENST00000380276 M0R2N6 131 aa25.86■■□□□ 1.73
U2AF1-202ENST00000380276 SRGAP2CP0DJJ0 459 aa25.86■■□□□ 1.73
U2AF1-202ENST00000380276 TMEM143Q96AN5 459 aa25.86■■□□□ 1.73
U2AF1-202ENST00000380276 ZNF274Q96GC6 653 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-202ENST00000380276 IRF2BPLQ9H1B7 796 aa25.86■■□□□ 1.73
U2AF1-202ENST00000380276 AGPAT5Q9NUQ2 364 aa25.86■■□□□ 1.73
U2AF1-202ENST00000380276 LIMD1Q9UGP4 676 aa25.86■■□□□ 1.73
U2AF1-202ENST00000380276 H0Y858 1186 aa25.85■■□□□ 1.73
U2AF1-202ENST00000380276 ZNF280BQ86YH2 543 aa25.85■■□□□ 1.73
U2AF1-202ENST00000380276 PSPC1Q8WXF1 523 aaKnown RBP25.85■■□□□ 1.73
U2AF1-202ENST00000380276 MFSD1Q9H3U5 465 aa25.85■■□□□ 1.73
U2AF1-202ENST00000380276 RSAD1Q9HA92 442 aa25.85■■□□□ 1.73
U2AF1-202ENST00000380276 GFRA3O60609 400 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 ZNF623O75123 536 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 KLRC2P26717 231 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 NPY5RQ15761 445 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 NEK8Q86SG6 692 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 PPFIBP1Q86W92 1011 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 ZNF579Q8NAF0 562 aaKnown RBP25.84■■□□□ 1.73
U2AF1-202ENST00000380276 SLC22A17Q8WUG5 538 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 EMILIN2Q9BXX0 1053 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 IFT122Q9HBG6 1241 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 IRAK3Q9Y616 596 aa25.84■■□□□ 1.73
U2AF1-202ENST00000380276 CCNT1O60563 726 aaKnown RBP25.83■■□□□ 1.73
U2AF1-202ENST00000380276 P4HBP07237 508 aaKnown RBP25.83■■□□□ 1.73
U2AF1-202ENST00000380276 PPP2R5CQ13362 524 aa25.83■■□□□ 1.73
U2AF1-202ENST00000380276 PTPN14Q15678 1187 aa25.83■■□□□ 1.73
U2AF1-202ENST00000380276 NCAPH2Q6IBW4 605 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms