RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 KPNB1Q14974 876 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SAFBQ15424 915 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 EAPPQ56P03 285 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 POTEEQ6S8J3 1075 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 C3orf62Q6ZUJ4 267 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 MAGEB6Q8N7X4 407 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 IGDCC4Q8TDY8 1250 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 UBLCP1Q8WVY7 318 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SREK1Q8WXA9 508 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 MYO3BQ8WXR4 1341 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 KRT12Q99456 494 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 CCDC28BQ9BUN5 200 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 RNF26Q9BY78 433 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 NSRP1Q9H0G5 558 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 TCP11L1Q9NUJ3 509 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 STK32BQ9NY57 414 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 LIMA1Q9UHB6 759 aaKnown RBP8.05□□□□□ -1.12
CDKL5-201ENST00000379989 SERTAD1Q9UHV2 236 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 IRS2Q9Y4H2 1338 aa8.05□□□□□ -1.12
CDKL5-201ENST00000379989 GOLGA8BA8MQT2 603 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 GNPATO15228 680 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MOCS3O95396 460 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 TXKP42681 527 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MMP13P45452 471 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 COPB1P53618 953 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FKBP1AP62942 108 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 ERVK-9P63128 1117 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 HLTFQ14527 1009 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 TMEM259Q4ZIN3 620 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SOGA3Q5TF21 947 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SNX30Q5VWJ9 437 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 APOA5Q6Q788 366 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SLC43A3Q8NBI5 491 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SPATA20Q8TB22 786 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 LRRC45Q96CN5 670 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SELENOSQ9BQE4 189 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 EIF2AQ9BY44 585 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 NEUROG2Q9H2A3 272 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FAIMQ9NVQ4 179 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 TBCCD1Q9NVR7 557 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 TAB2Q9NYJ8 693 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MYH6P13533 1939 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 NPHP3-ACAD11A0A0J9YXS1 232 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 RAD51CO43502 376 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 COBLO75128 1261 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 DEXIO95424 95 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 GJB6O95452 261 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 PABPC4LP0CB38 370 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 CDK4P11802 303 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 CYLC1P35663 651 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 GSTA3Q16772 222 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MARK2Q7KZI7 788 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 LRRC8CQ8TDW0 803 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 ATP6V0A1Q93050 837 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 DHX36Q9H2U1 1008 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FOXP1Q9H334 677 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 BTBD7Q9P203 1132 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 STOML1Q9UBI4 398 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 LRWD1Q9UFC0 647 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 RASAL2Q9UJF2 1139 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FBXO9Q9UK97 447 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FAM32AQ9Y421 112 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SLC12A7Q9Y666 1083 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 LTBP1Q14766 1721 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 ZNF263O14978 683 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MYBP10242 640 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 R3HDM1Q15032 1099 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MEA1Q16626 185 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 WDR75Q8IWA0 830 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SLC7A5P1Q8MH63 180 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FAM133AQ8N9E0 248 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 NMD3Q96D46 503 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 FAM84BQ96KN1 310 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 ZMAT2Q96NC0 199 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 MRIQ9BWK5 157 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 TLR10Q9BXR5 811 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 ISCUQ9H1K1 167 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 DCLRE1BQ9H816 532 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 LARSQ9P2J5 1176 aaKnown RBP8.04□□□□□ -1.12
CDKL5-201ENST00000379989 SLC4A4Q9Y6R1 1079 aa8.04□□□□□ -1.12
CDKL5-201ENST00000379989 HGSO14964 777 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ECE2O60344 883 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SUN1O94901 812 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 VDRP11473 427 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 CYP7A1P22680 504 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 IFNAR2P48551 515 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ARFIP2P53365 341 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ANTXR2P58335 489 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 ORC2Q13416 577 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 WTAPQ15007 396 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 INAQ16352 499 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 WDR72Q3MJ13 1102 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDKL5-201ENST00000379989 CFAP221Q4G0U5 840 aa8.03□□□□□ -1.12
CDKL5-201ENST00000379989 TMEM67Q5HYA8 995 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms