RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 RUNDC3BQ96NL0 473 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 FHDC1Q9C0D6 1143 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-202ENST00000379826 NAGPAQ9UK23 515 aa12.24□□□□□ -0.45
SMAD9-202ENST00000379826 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 TRAF1Q13077 416 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 THAP2Q9H0W7 228 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 HIP1RO75146 1068 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF844Q08AG5 666 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 GRIK5Q16478 980 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 MSL3Q8N5Y2 521 aaKnown RBP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 MCUR1Q96AQ8 359 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 FAM167BQ9BTA0 163 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SPAG7O75391 227 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SCTRP47872 440 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 GPC5P78333 572 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 JAMLQ86YT9 394 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 RHOT2Q8IXI1 618 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 RUSC1Q9BVN2 902 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 DIS3Q9Y2L1 958 aaKnown RBP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 FOSP01100 380 aaPredicted RBP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 CYP11B2P19099 503 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SKOR1P84550 965 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 IL9RQ01113 521 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SLC29A2Q14542 456 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF564Q8TBZ8 553 aaPredicted RBP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMAD9-202ENST00000379826 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-202ENST00000379826 PDXKO00764 312 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 PSMC6P62333 389 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 ECM1Q16610 540 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 BAP1Q92560 729 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 TGS1Q96RS0 853 aaKnown RBP12.22□□□□□ -0.45
SMAD9-202ENST00000379826 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 IMPG2Q9BZV3 1241 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 ZNF148Q9UQR1 794 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 PJA2O43164 708 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 BMP3P12645 472 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 HSPA9P38646 679 aaKnown RBP12.22□□□□□ -0.45
SMAD9-202ENST00000379826 RWDD2BP57060 319 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 TAF11Q15544 211 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 DCUN1D2Q6PH85 259 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 RAB20Q9NX57 234 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 N4BP2Q86UW6 1770 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-202ENST00000379826 ABCB11O95342 1321 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 SCP2P22307 547 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 DRP2Q13474 957 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 SLC30A10Q6XR72 485 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 ACCSQ96QU6 501 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 DAGLAQ9Y4D2 1042 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 NID2Q14112 1375 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 EMSYQ7Z589 1322 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 H0Y3Z8 333 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 PODXLO00592 558 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 KCNJ1P48048 391 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 CCNA1P78396 465 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 COG2Q14746 738 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 CNPY4Q8N129 248 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
SMAD9-202ENST00000379826 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 TAF12Q16514 161 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 SLC30A5Q8TAD4 765 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 MAIP1Q8WWC4 291 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 POMGNT1Q8WZA1 660 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 FGFBP2Q9BYJ0 223 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 NSFP46459 744 aaKnown RBP12.21□□□□□ -0.45
SMAD9-202ENST00000379826 FMO5P49326 533 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 MXI1P50539 228 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 KRT17Q04695 432 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 ITGB3BPQ13352 177 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-202ENST00000379826 PASD1Q8IV76 773 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 SUCLA2Q9P2R7 463 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-202ENST00000379826 BCL9O00512 1426 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 PHF2O75151 1096 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
SMAD9-202ENST00000379826 PLS3P13797 630 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 CHRNA3P32297 505 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 DYNLT1P63172 113 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 AP3B2Q13367 1082 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 TSNAXIP1Q2TAA8 658 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 ARHGEF18Q6ZSZ5 1173 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 SMC6Q96SB8 1091 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 MMTAG2Q9BU76 263 aaKnown RBP12.21□□□□□ -0.45
SMAD9-202ENST00000379826 TTYH3Q9C0H2 523 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 LARSQ9P2J5 1176 aaKnown RBP12.21□□□□□ -0.45
SMAD9-202ENST00000379826 ANAPC7Q9UJX3 599 aa12.21□□□□□ -0.45
SMAD9-202ENST00000379826 CLRN2A0PK11 232 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 CYP26A1O43174 497 aa12.21□□□□□ -0.46
SMAD9-202ENST00000379826 ALAS1P13196 640 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms